Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PRAMEF14-201ENST00000334600 1690 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 CEACAM1-204ENST00000358394 1484 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 RNU6-543P-201ENST00000362576 108 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 RNU6-560P-201ENST00000364007 108 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 RNU6-297P-201ENST00000384636 107 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 RN7SKP29-201ENST00000410957 272 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 LSM12P1-201ENST00000411836 588 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 BEND7P1-201ENST00000422058 457 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 MEP1AP4-201ENST00000423244 1087 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 FBP2P1-202ENST00000424473 530 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 SEC13P1-201ENST00000429534 948 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 HMGB3P12-201ENST00000438745 556 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 H2AFZP6-201ENST00000444403 394 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 GTF2F2P2-201ENST00000445825 721 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 RPL7P12-201ENST00000446719 750 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 TRBV1-201ENST00000476502 284 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC092284.1-201ENST00000511386 1289 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 RNU6-1281P-201ENST00000516223 105 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 NRBF2P4-201ENST00000520874 850 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 BRD9P1-201ENST00000529855 560 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 HMBOX1-IT1-201ENST00000558292 347 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PCSK6-AS1-201ENST00000558696 639 ntTSL 3 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC104041.1-201ENST00000560054 569 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 SLC7A5P1-201ENST00000568957 537 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC010385.2-201ENST00000603743 490 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AL592148.2-201ENST00000612210 372 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 ATM-228ENST00000639240 498 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AL606490.2-201ENST00000457562 1330 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 IGSF1-202ENST00000370900 1786 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 SOCS5P5-201ENST00000402732 1586 ntBASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 KRBOX4-201ENST00000298190 1354 ntAPPRIS P3 TSL 2 BASIC9.24□□□□□ -0.93
KRTAP3-2Q9BYR7 KRT8P29-201ENST00000420409 1371 ntBASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms