Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 MIR663B-201ENST00000408361 115 ntBASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 SNORA50C-201ENST00000408535 133 ntBASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AC234783.1-201ENST00000441761 496 ntBASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AC104073.2-201ENST00000453737 312 ntBASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 SNORA50.1-201ENST00000628590 135 ntBASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AHCYP4-201ENST00000419201 1315 ntBASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 SNORD3B-2-202ENST00000571722 791 ntBASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 MIR3615-201ENST00000581999 87 ntBASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 AC008805.1-201ENST00000590892 364 ntBASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 AC068587.8-201ENST00000641239 219 ntBASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 Z82170.1-201ENST00000625081 3192 ntBASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 AL031719.1-201ENST00000623365 2587 ntBASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 C8orf49-201ENST00000525043 1968 ntBASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO3Q9BXY4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 BRD7P5-201ENST00000299197 1822 ntBASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms