Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 ORAOV1P1-201ENST00000503108 395 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 IGHV3-37-201ENST00000518544 340 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 TMCO5B-205ENST00000530020 894 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 SIGLEC18P-201ENST00000602271 909 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AP001065.2-201ENST00000617205 644 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AC009560.1-201ENST00000620208 434 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AL022313.4-201ENST00000562756 2046 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 CICP17-201ENST00000418553 2377 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AL627422.1-201ENST00000434104 580 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 AC079112.1-201ENST00000454972 939 ntBASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.28■□□□□ 0.36
RPAP1Q9BWH6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
RPAP1Q9BWH6 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 AL807761.2-201ENST00000422849 729 ntBASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.27■□□□□ 0.35
RPAP1Q9BWH6 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms