Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 AC008132.1-202ENST00000342005 1389 ntBASIC12.71□□□□□ -0.37
APH1AQ96BI3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 CCT8L1P-201ENST00000465400 1674 ntBASIC12.71□□□□□ -0.37
APH1AQ96BI3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 RNA5SP359-201ENST00000364838 113 ntBASIC12.71□□□□□ -0.37
APH1AQ96BI3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 SLC25A24P2-201ENST00000415059 510 ntBASIC12.71□□□□□ -0.37
APH1AQ96BI3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 AC024681.1-201ENST00000521917 487 ntBASIC12.71□□□□□ -0.37
APH1AQ96BI3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.71□□□□□ -0.37
APH1AQ96BI3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APH1AQ96BI3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.71□□□□□ -0.38
APH1AQ96BI3 PTENP1-202ENST00000532280 3996 ntBASIC12.71□□□□□ -0.38
APH1AQ96BI3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
APH1AQ96BI3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APH1AQ96BI3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.71□□□□□ -0.38
APH1AQ96BI3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APH1AQ96BI3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APH1AQ96BI3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
APH1AQ96BI3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APH1AQ96BI3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.71□□□□□ -0.38
APH1AQ96BI3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
APH1AQ96BI3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.71□□□□□ -0.38
APH1AQ96BI3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.71□□□□□ -0.38
APH1AQ96BI3 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.71□□□□□ -0.38
APH1AQ96BI3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.71□□□□□ -0.38
APH1AQ96BI3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
APH1AQ96BI3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 LINC01165-201ENST00000445190 1623 ntBASIC12.7□□□□□ -0.38
APH1AQ96BI3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 AL662890.1-201ENST00000396818 632 ntBASIC12.7□□□□□ -0.38
APH1AQ96BI3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 IGHJ2P-201ENST00000454480 60 ntBASIC12.7□□□□□ -0.38
APH1AQ96BI3 AC012618.1-201ENST00000461223 412 ntBASIC12.7□□□□□ -0.38
APH1AQ96BI3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 RN7SL277P-201ENST00000481521 288 ntBASIC12.7□□□□□ -0.38
APH1AQ96BI3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
APH1AQ96BI3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APH1AQ96BI3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms