Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 AP001258.2-201ENST00000529891 490 ntBASIC15.21■□□□□ 0.03
LMO3Q8TAP4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 AL157791.1-201ENST00000553667 1699 ntBASIC15.21■□□□□ 0.03
LMO3Q8TAP4 AC093462.1-201ENST00000621167 1683 ntBASIC15.21■□□□□ 0.03
LMO3Q8TAP4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
LMO3Q8TAP4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.21■□□□□ 0.02
LMO3Q8TAP4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.21■□□□□ 0.02
LMO3Q8TAP4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LMO3Q8TAP4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.21■□□□□ 0.02
LMO3Q8TAP4 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 AL391647.1-201ENST00000395664 511 ntBASIC15.2■□□□□ 0.02
LMO3Q8TAP4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 RN7SL774P-201ENST00000577467 290 ntBASIC15.2■□□□□ 0.02
LMO3Q8TAP4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 AC079336.7-201ENST00000623428 1078 ntBASIC15.2■□□□□ 0.02
LMO3Q8TAP4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.2■□□□□ 0.02
LMO3Q8TAP4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 MIR1247-201ENST00000408206 136 ntBASIC15.19■□□□□ 0.02
LMO3Q8TAP4 ACTG1P2-201ENST00000415776 1125 ntBASIC15.19■□□□□ 0.02
LMO3Q8TAP4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 ACTG1P11-201ENST00000425411 1125 ntBASIC15.19■□□□□ 0.02
LMO3Q8TAP4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.19■□□□□ 0.02
LMO3Q8TAP4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms