Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 RASGEF1B-201ENST00000264400 2277 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 MET-201ENST00000318493 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 NVL-216ENST00000482491 3003 ntTSL 5 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 IFT46-202ENST00000264021 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 CA13-201ENST00000321764 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 CAPN9-202ENST00000354537 2484 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 SNX6-201ENST00000362031 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 PTK2B-203ENST00000397501 4719 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 LILRB2-205ENST00000434421 2773 ntTSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AL136981.1-203ENST00000451452 3844 ntBASIC8.5□□□□□ -1.05
SVIPQ8NHG7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AC005996.1-201ENST00000478788 1586 ntBASIC8.5□□□□□ -1.05
SVIPQ8NHG7 PPP4R1L-207ENST00000493688 2325 ntTSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AC091691.1-201ENST00000583587 1018 ntBASIC8.5□□□□□ -1.05
SVIPQ8NHG7 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC8.5□□□□□ -1.05
SVIPQ8NHG7 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 HLA-B-256ENST00000639848 1089 ntBASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AC083906.6-201ENST00000641366 219 ntBASIC8.5□□□□□ -1.05
SVIPQ8NHG7 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 SPOP-202ENST00000393328 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 SLC7A8-201ENST00000316902 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 SRD5A3-AS1-201ENST00000433175 1617 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 IARS2P1-201ENST00000508226 3173 ntBASIC8.5□□□□□ -1.05
SVIPQ8NHG7 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 WNT4-201ENST00000290167 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 ZNF556-201ENST00000307635 6574 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AC026271.4-201ENST00000578214 1833 ntBASIC8.5□□□□□ -1.05
SVIPQ8NHG7 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 CD1E-208ENST00000368163 1678 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 ZCCHC8-210ENST00000633063 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 PTCH2-203ENST00000447098 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 MTMR10-202ENST00000563714 2216 ntTSL 2 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 AP003108.3-201ENST00000623765 2234 ntBASIC8.49□□□□□ -1.05
SVIPQ8NHG7 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 PYGL-205ENST00000532462 2711 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 FABP7-201ENST00000356535 2086 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 ELOA2-201ENST00000332567 3050 ntAPPRIS P2 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 MARCH10-202ENST00000456609 3057 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 DAPP1-203ENST00000512369 1440 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 MORN3-201ENST00000355329 3803 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 GNL3L-202ENST00000360845 2135 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 CFL1P1-203ENST00000438248 2120 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 AC078842.1-201ENST00000438969 553 ntTSL 4 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 AC007272.1-201ENST00000448256 1269 ntTSL 5 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 AC106868.1-201ENST00000505272 992 ntBASIC8.49□□□□□ -1.05
SVIPQ8NHG7 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC8.49□□□□□ -1.05
SVIPQ8NHG7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms