RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
ZNF556-201ENST00000307635 NISCHQ9Y2I1 1504 aa18.97■□□□□ 0.63
ZNF556-201ENST00000307635 FAM9AQ8IZU1 332 aaPredicted RBP17.48■□□□□ 0.39
ZNF556-201ENST00000307635 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
ZNF556-201ENST00000307635 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
ZNF556-201ENST00000307635 ABCC9O60706 1549 aa16.92■□□□□ 0.3
ZNF556-201ENST00000307635 APLP2Q06481 763 aa16.89■□□□□ 0.29
ZNF556-201ENST00000307635 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
ZNF556-201ENST00000307635 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
ZNF556-201ENST00000307635 ATP1B4Q9UN42 357 aaPredicted RBP16.51■□□□□ 0.23
ZNF556-201ENST00000307635 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
ZNF556-201ENST00000307635 TRIM41Q8WV44 630 aa16.4■□□□□ 0.22
ZNF556-201ENST00000307635 MYT1LQ9UL68 1186 aa16.3■□□□□ 0.2
ZNF556-201ENST00000307635 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
ZNF556-201ENST00000307635 TTBK1Q5TCY1 1321 aaPredicted RBP16.21■□□□□ 0.19
ZNF556-201ENST00000307635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.19
ZNF556-201ENST00000307635 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
ZNF556-201ENST00000307635 CCDC180Q9P1Z9 1646 aa16.17■□□□□ 0.18
ZNF556-201ENST00000307635 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
ZNF556-201ENST00000307635 FBLN2P98095 1184 aa15.99■□□□□ 0.15
ZNF556-201ENST00000307635 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
ZNF556-201ENST00000307635 NACADO15069 1562 aa15.75■□□□□ 0.11
ZNF556-201ENST00000307635 NPM1P06748 294 aaKnown RBP eCLIP15.72■□□□□ 0.11
ZNF556-201ENST00000307635 CHIC1Q5VXU3 224 aa15.7■□□□□ 0.1
ZNF556-201ENST00000307635 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
ZNF556-201ENST00000307635 ERCC6Q03468 1493 aa15.58■□□□□ 0.08
ZNF556-201ENST00000307635 ESF1Q9H501 851 aaKnown RBP15.56■□□□□ 0.08
ZNF556-201ENST00000307635 PCGF6Q9BYE7 350 aa15.54■□□□□ 0.08
ZNF556-201ENST00000307635 PELP1Q8IZL8 1130 aaKnown RBP15.53■□□□□ 0.08
ZNF556-201ENST00000307635 ITGAEP38570 1179 aa15.5■□□□□ 0.07
ZNF556-201ENST00000307635 CCER1Q8TC90 406 aaPredicted RBP15.49■□□□□ 0.07
ZNF556-201ENST00000307635 CDK11AQ9UQ88 783 aaPredicted RBP15.45■□□□□ 0.06
ZNF556-201ENST00000307635 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
ZNF556-201ENST00000307635 BCANQ96GW7 911 aa15.4■□□□□ 0.06
ZNF556-201ENST00000307635 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
ZNF556-201ENST00000307635 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
ZNF556-201ENST00000307635 ZEB1P37275 1124 aaPredicted RBP15.36■□□□□ 0.05
ZNF556-201ENST00000307635 BAZ1BQ9UIG0 1483 aaKnown RBP15.35■□□□□ 0.05
ZNF556-201ENST00000307635 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
ZNF556-201ENST00000307635 POLR3GLQ9BT43 218 aa15.29■□□□□ 0.04
ZNF556-201ENST00000307635 PPARGC1BQ86YN6 1023 aaKnown RBP15.28■□□□□ 0.04
ZNF556-201ENST00000307635 ARID3CA6NKF2 412 aa15.25■□□□□ 0.03
ZNF556-201ENST00000307635 P3H3Q8IVL6 736 aa15.24■□□□□ 0.03
ZNF556-201ENST00000307635 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
ZNF556-201ENST00000307635 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
ZNF556-201ENST00000307635 ZNF777Q9ULD5 760 aaPredicted RBP15.21■□□□□ 0.03
ZNF556-201ENST00000307635 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
ZNF556-201ENST00000307635 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
ZNF556-201ENST00000307635 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
ZNF556-201ENST00000307635 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
ZNF556-201ENST00000307635 PDS5BQ9NTI5 1447 aa15.08■□□□□ 0.01
ZNF556-201ENST00000307635 CECR2Q9BXF3 1484 aa15.05■□□□□ 0
ZNF556-201ENST00000307635 SMARCA2P51531 1590 aa15.05■□□□□ -0
ZNF556-201ENST00000307635 LOC105371045A0A1W2PR82 267 aa15.03■□□□□ -0
ZNF556-201ENST00000307635 ARID4BQ4LE39 1312 aaPredicted RBP15.03■□□□□ -0
ZNF556-201ENST00000307635 TRIM26Q12899 539 aaPredicted RBP15.03■□□□□ -0
ZNF556-201ENST00000307635 CHGAP10645 457 aaKnown RBP14.99□□□□□ -0.01
ZNF556-201ENST00000307635 KCNH8Q96L42 1107 aa14.95□□□□□ -0.02
ZNF556-201ENST00000307635 NEFLP07196 543 aa14.95□□□□□ -0.02
ZNF556-201ENST00000307635 ZNF326Q5BKZ1 582 aaKnown RBP14.94□□□□□ -0.02
ZNF556-201ENST00000307635 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
ZNF556-201ENST00000307635 TSPY4P0CV99 314 aa14.92□□□□□ -0.02
ZNF556-201ENST00000307635 TSPY10P0CW01 314 aa14.92□□□□□ -0.02
ZNF556-201ENST00000307635 NEFMP07197 916 aa14.89□□□□□ -0.03
ZNF556-201ENST00000307635 CENPBP07199 599 aaPredicted RBP14.89□□□□□ -0.03
ZNF556-201ENST00000307635 MYO15BQ96JP2 1530 aa14.89□□□□□ -0.03
ZNF556-201ENST00000307635 KIF27Q86VH2 1401 aa14.87□□□□□ -0.03
ZNF556-201ENST00000307635 SLC24A1O60721 1099 aa14.86□□□□□ -0.03
ZNF556-201ENST00000307635 CNGB1Q14028 1251 aaPredicted RBP14.86□□□□□ -0.03
ZNF556-201ENST00000307635 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
ZNF556-201ENST00000307635 WRNQ14191 1432 aaPredicted RBP eCLIP14.84□□□□□ -0.03
ZNF556-201ENST00000307635 NEUROD1Q13562 356 aa14.84□□□□□ -0.03
ZNF556-201ENST00000307635 MTUS2Q5JR59 1369 aa14.83□□□□□ -0.04
ZNF556-201ENST00000307635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.041e-7■■■□□ 18.5
ZNF556-201ENST00000307635 PPP1R15AO75807 674 aaPredicted RBP14.82□□□□□ -0.04
ZNF556-201ENST00000307635 C14orf37Q86TY3 774 aa14.8□□□□□ -0.04
ZNF556-201ENST00000307635 EIF4G1Q04637 1599 aaKnown RBP14.76□□□□□ -0.05
ZNF556-201ENST00000307635 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
ZNF556-201ENST00000307635 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
ZNF556-201ENST00000307635 EEA1Q15075 1411 aa14.76□□□□□ -0.05
ZNF556-201ENST00000307635 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
ZNF556-201ENST00000307635 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
ZNF556-201ENST00000307635 ERICH6Q7L0X2 663 aa14.7□□□□□ -0.06
ZNF556-201ENST00000307635 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
ZNF556-201ENST00000307635 ACIN1Q9UKV3 1341 aaKnown RBP14.68□□□□□ -0.06
ZNF556-201ENST00000307635 SOGA1O94964 1423 aa14.68□□□□□ -0.06
ZNF556-201ENST00000307635 CADPSQ9ULU8 1353 aa14.67□□□□□ -0.06
ZNF556-201ENST00000307635 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
ZNF556-201ENST00000307635 CUX2O14529 1486 aa14.67□□□□□ -0.06
ZNF556-201ENST00000307635 CLIP1P30622 1438 aa14.66□□□□□ -0.06
ZNF556-201ENST00000307635 ABCC8Q09428 1581 aa14.64□□□□□ -0.07
ZNF556-201ENST00000307635 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
ZNF556-201ENST00000307635 ZBTB47Q9UFB7 747 aaPredicted RBP14.63□□□□□ -0.07
ZNF556-201ENST00000307635 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
ZNF556-201ENST00000307635 CHIC2Q9UKJ5 165 aa14.62□□□□□ -0.07
ZNF556-201ENST00000307635 CFDP1Q9UEE9 299 aaPredicted RBP14.62□□□□□ -0.07
ZNF556-201ENST00000307635 YTHDC1Q96MU7 727 aaKnown RBP14.59□□□□□ -0.07
ZNF556-201ENST00000307635 CARMIL1Q5VZK9 1371 aa14.58□□□□□ -0.07
ZNF556-201ENST00000307635 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
ZNF556-201ENST00000307635 KANK1Q14678 1352 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms