Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 U91328.1-201ENST00000437528 223 ntBASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 KLF2P4-201ENST00000451959 1225 ntBASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 CTBP2P5-201ENST00000454986 1264 ntBASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 KRT17P8-201ENST00000540749 863 ntBASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 AC132192.2-201ENST00000596206 1147 ntBASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 AL512343.1-201ENST00000605837 169 ntBASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF439Q8NDP4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 ANKRD19P-201ENST00000338192 862 ntBASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 AC234783.1-201ENST00000441761 496 ntBASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 MBLAC2-202ENST00000514906 1936 ntBASIC11.94□□□□□ -0.5
ZNF439Q8NDP4 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ZNF439Q8NDP4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF439Q8NDP4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms