Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 KRT8P24-201ENST00000560290 1559 ntBASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AC026316.1-201ENST00000398900 414 ntBASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AC006987.1-201ENST00000413610 527 ntBASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 RN7SL665P-201ENST00000578793 300 ntBASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 MIR4522-201ENST00000584932 87 ntBASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AC103691.2-201ENST00000618824 433 ntBASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AC128714.1-201ENST00000637035 887 ntBASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
ARHGEF39Q8N4T4 AL590824.1-201ENST00000403828 1349 ntBASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 RPL18AP8-201ENST00000486071 528 ntBASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC095040.1-201ENST00000513286 675 ntBASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC079328.1-201ENST00000560358 952 ntBASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AL591122.2-201ENST00000624125 1853 ntBASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC068760.1-201ENST00000493579 1953 ntBASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.41□□□□□ -0.26
ARHGEF39Q8N4T4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.4□□□□□ -0.26
ARHGEF39Q8N4T4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms