Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VPS8Q8N3P4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 MARK2P9-201ENST00000430958 1727 ntBASIC21.9■■□□□ 1.1
VPS8Q8N3P4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 EEF1GP8-201ENST00000506566 1154 ntBASIC21.9■■□□□ 1.1
VPS8Q8N3P4 AC093826.1-201ENST00000508655 993 ntBASIC21.9■■□□□ 1.1
VPS8Q8N3P4 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 AC072061.1-201ENST00000569710 2234 ntBASIC21.9■■□□□ 1.1
VPS8Q8N3P4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 GRK6P1-201ENST00000400595 1711 ntBASIC21.9■■□□□ 1.1
VPS8Q8N3P4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VPS8Q8N3P4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 DKKL1P1-201ENST00000400550 698 ntBASIC21.89■■□□□ 1.1
VPS8Q8N3P4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 BATF-202ENST00000555504 361 ntTSL 2 BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 MIR3940-201ENST00000579148 102 ntBASIC21.89■■□□□ 1.1
VPS8Q8N3P4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 U62317.3-201ENST00000608319 855 ntBASIC21.89■■□□□ 1.1
VPS8Q8N3P4 CR392039.2-201ENST00000623182 509 ntBASIC21.89■■□□□ 1.1
VPS8Q8N3P4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
VPS8Q8N3P4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 Z98885.3-201ENST00000624882 1757 ntBASIC21.89■■□□□ 1.09
VPS8Q8N3P4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 AC245140.2-201ENST00000624054 1939 ntBASIC21.89■■□□□ 1.09
VPS8Q8N3P4 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 CTBP2P4-201ENST00000513884 920 ntBASIC21.89■■□□□ 1.09
VPS8Q8N3P4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VPS8Q8N3P4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 RCC2P5-201ENST00000492126 1487 ntBASIC21.88■■□□□ 1.09
VPS8Q8N3P4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VPS8Q8N3P4 AC041040.2-201ENST00000622926 2899 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms