Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 AC008620.2-201ENST00000510294 1569 ntBASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 AC025183.3-201ENST00000623526 1482 ntBASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 RPSAP15-201ENST00000448168 861 ntBASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 AC114947.1-202ENST00000514136 344 ntBASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 MIR4754-201ENST00000582477 89 ntBASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 LINC01783-202ENST00000614408 828 ntBASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 BX284668.2-205ENST00000619677 828 ntBASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
C12orf56Q8IXR9 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 FMO6P-201ENST00000236166 1620 ntBASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SNORA50C-201ENST00000408535 133 ntBASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 RN7SL11P-201ENST00000471305 293 ntBASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 ALG1L13P-202ENST00000519320 584 ntBASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 MIR3619-201ENST00000579667 83 ntBASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 AC103810.3-201ENST00000583567 96 ntBASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SNORA50.1-201ENST00000628590 135 ntBASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf56Q8IXR9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms