Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 AGPAT5P1-201ENST00000455855 1019 ntBASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 AC010976.2-201ENST00000609697 852 ntBASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 AC022726.2-201ENST00000634673 547 ntBASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 AC019109.1-201ENST00000401725 1874 ntBASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 ODCP-201ENST00000459650 1639 ntBASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.73□□□□□ -0.05
NPAS3Q8IXF0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 AL135901.1-201ENST00000451812 333 ntBASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 DNM1P51-201ENST00000558149 522 ntBASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 RN7SL596P-201ENST00000582123 288 ntBASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 AC055811.3-201ENST00000584952 686 ntBASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 AL359091.4-201ENST00000610052 409 ntBASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 MIR6074-201ENST00000612054 107 ntBASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 AL672207.1-201ENST00000328462 1570 ntBASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPAS3Q8IXF0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.71□□□□□ -0.05
NPAS3Q8IXF0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms