Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 RN7SL774P-201ENST00000577467 290 ntBASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 NDUFV2P1-201ENST00000596415 907 ntBASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 AC079791.1-201ENST00000605356 973 ntBASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 AC100757.4-201ENST00000626934 759 ntBASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 NAP1L6-202ENST00000641404 1222 ntBASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SCUBE3Q8IX30 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.08■□□□□ 0.01
SCUBE3Q8IX30 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SCUBE3Q8IX30 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SCUBE3Q8IX30 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
SCUBE3Q8IX30 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.08■□□□□ 0.01
SCUBE3Q8IX30 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SCUBE3Q8IX30 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SCUBE3Q8IX30 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SCUBE3Q8IX30 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SCUBE3Q8IX30 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 LINC01165-201ENST00000445190 1623 ntBASIC15.08■□□□□ 0
SCUBE3Q8IX30 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 FXNP2-201ENST00000411625 547 ntBASIC15.08■□□□□ 0
SCUBE3Q8IX30 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
SCUBE3Q8IX30 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SCUBE3Q8IX30 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.07■□□□□ 0
SCUBE3Q8IX30 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SCUBE3Q8IX30 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms