Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 AC063926.3-201ENST00000624734 5658 ntBASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 AC113367.3-201ENST00000508316 1912 ntBASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 FAM86KP-201ENST00000509817 987 ntBASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 AC106047.2-201ENST00000511723 743 ntBASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 AL049840.2-201ENST00000602722 535 ntBASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
NPAS4Q8IUM7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 FAM21EP-201ENST00000417804 985 ntBASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AC068831.5-201ENST00000557387 328 ntBASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AC079416.2-201ENST00000625035 1193 ntBASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS4Q8IUM7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 PKD1P5-201ENST00000532415 10291 ntBASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NPAS4Q8IUM7 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms