Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 AL359881.3-201ENST00000602640 1721 ntBASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 FNTAP2-201ENST00000430308 634 ntBASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 AC011742.3-201ENST00000439053 820 ntBASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 AL139099.5-201ENST00000635274 300 ntBASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 AC068587.10-201ENST00000641210 219 ntBASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 AP002353.1-201ENST00000528257 1599 ntBASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LYSMD3Q7Z3D4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AC092580.1-201ENST00000433998 658 ntBASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AL805961.1-203ENST00000641078 1258 ntBASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 CCT8L1P-201ENST00000465400 1674 ntBASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms