Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 AC024681.1-201ENST00000521917 487 ntBASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 MIR6769A-201ENST00000617340 73 ntBASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 AC079336.7-201ENST00000623428 1078 ntBASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC41PQ6P2S7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 AC015909.5-201ENST00000624336 2266 ntBASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 PDIA3P2-201ENST00000428073 158 ntBASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 ACTG1P17-201ENST00000558391 1119 ntBASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC17.27■□□□□ 0.36
TTC41PQ6P2S7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TTC41PQ6P2S7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 FAM90A12P-201ENST00000519497 2375 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 FAM90A24P-201ENST00000520792 2369 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 AC005077.2-201ENST00000449786 690 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 RN7SL258P-201ENST00000478664 300 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 NDUFB10P1-201ENST00000567319 521 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 AC103810.3-201ENST00000583567 96 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 LINC01783-202ENST00000614408 828 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 BX284668.2-205ENST00000619677 828 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 KRT8P31-201ENST00000504812 1408 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.26■□□□□ 0.35
TTC41PQ6P2S7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms