Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.64□□□□□ -0.23
SKP1P63208 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.64□□□□□ -0.23
SKP1P63208 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.64□□□□□ -0.23
SKP1P63208 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SKP1P63208 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SKP1P63208 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.64□□□□□ -0.23
SKP1P63208 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SKP1P63208 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
SKP1P63208 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.64□□□□□ -0.23
SKP1P63208 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.64□□□□□ -0.23
SKP1P63208 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
SKP1P63208 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.64□□□□□ -0.23
SKP1P63208 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 PTPRVP-205ENST00000641549 5067 ntBASIC13.63□□□□□ -0.23
SKP1P63208 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 AC097359.2-201ENST00000604992 2389 ntBASIC13.63□□□□□ -0.23
SKP1P63208 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SKP1P63208 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.63□□□□□ -0.23
SKP1P63208 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.63□□□□□ -0.23
SKP1P63208 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 ZNF767P-206ENST00000513792 565 ntBASIC13.63□□□□□ -0.23
SKP1P63208 AL512310.5-201ENST00000551999 515 ntBASIC13.63□□□□□ -0.23
SKP1P63208 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.63□□□□□ -0.23
SKP1P63208 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.63□□□□□ -0.23
SKP1P63208 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.63□□□□□ -0.23
SKP1P63208 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SKP1P63208 FRMPD2B-201ENST00000431305 1347 ntBASIC13.63□□□□□ -0.23
SKP1P63208 CCT8L1P-201ENST00000465400 1674 ntBASIC13.63□□□□□ -0.23
SKP1P63208 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SKP1P63208 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SKP1P63208 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SKP1P63208 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.62□□□□□ -0.23
SKP1P63208 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SKP1P63208 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms