Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.59□□□□□ -0.23
PRPH2P23942 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
PRPH2P23942 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRPH2P23942 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.59□□□□□ -0.23
PRPH2P23942 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.59□□□□□ -0.23
PRPH2P23942 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PRPH2P23942 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
PRPH2P23942 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PRPH2P23942 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PRPH2P23942 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRPH2P23942 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.23
PRPH2P23942 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PRPH2P23942 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRPH2P23942 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
PRPH2P23942 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRPH2P23942 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
PRPH2P23942 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PRPH2P23942 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
PRPH2P23942 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PRPH2P23942 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.23
PRPH2P23942 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
PRPH2P23942 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.58□□□□□ -0.24
PRPH2P23942 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 AC004241.5-201ENST00000623870 2448 ntBASIC13.58□□□□□ -0.24
PRPH2P23942 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.58□□□□□ -0.24
PRPH2P23942 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PRPH2P23942 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.58□□□□□ -0.24
PRPH2P23942 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.58□□□□□ -0.24
PRPH2P23942 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.58□□□□□ -0.24
PRPH2P23942 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.58□□□□□ -0.24
PRPH2P23942 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 RPSAP36-202ENST00000494591 1261 ntBASIC13.58□□□□□ -0.24
PRPH2P23942 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.58□□□□□ -0.24
PRPH2P23942 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.58□□□□□ -0.24
PRPH2P23942 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.58□□□□□ -0.24
PRPH2P23942 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.58□□□□□ -0.24
PRPH2P23942 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.58□□□□□ -0.24
PRPH2P23942 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.58□□□□□ -0.24
PRPH2P23942 AC008805.1-201ENST00000590892 364 ntBASIC13.58□□□□□ -0.24
PRPH2P23942 BNIP3P13-201ENST00000599968 566 ntBASIC13.58□□□□□ -0.24
PRPH2P23942 LINC02084-201ENST00000606069 1096 ntBASIC13.58□□□□□ -0.24
PRPH2P23942 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.58□□□□□ -0.24
PRPH2P23942 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.58□□□□□ -0.24
PRPH2P23942 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 AL139158.3-201ENST00000641212 1562 ntBASIC13.58□□□□□ -0.24
PRPH2P23942 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PRPH2P23942 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.58□□□□□ -0.24
PRPH2P23942 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRPH2P23942 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRPH2P23942 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRPH2P23942 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.57□□□□□ -0.24
PRPH2P23942 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRPH2P23942 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRPH2P23942 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.57□□□□□ -0.24
PRPH2P23942 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PRPH2P23942 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PRPH2P23942 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PRPH2P23942 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.57□□□□□ -0.24
PRPH2P23942 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PRPH2P23942 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms