Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC17.21■□□□□ 0.35
NCLP19338 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NCLP19338 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.21■□□□□ 0.35
NCLP19338 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.21■□□□□ 0.35
NCLP19338 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NCLP19338 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC17.21■□□□□ 0.34
NCLP19338 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
NCLP19338 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NCLP19338 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
NCLP19338 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
NCLP19338 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
NCLP19338 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 TP73-203ENST00000357733 4899 ntTSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 MYADML-201ENST00000474610 2147 ntBASIC17.2■□□□□ 0.34
NCLP19338 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NCLP19338 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.2■□□□□ 0.34
NCLP19338 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.2■□□□□ 0.34
NCLP19338 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.2■□□□□ 0.34
NCLP19338 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.2■□□□□ 0.34
NCLP19338 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 DUX4L47-201ENST00000566374 394 ntBASIC17.2■□□□□ 0.34
NCLP19338 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.2■□□□□ 0.34
NCLP19338 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.2■□□□□ 0.34
NCLP19338 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 AGAP10P-201ENST00000454844 2418 ntBASIC17.2■□□□□ 0.34
NCLP19338 AC004241.5-201ENST00000623870 2448 ntBASIC17.2■□□□□ 0.34
NCLP19338 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.2■□□□□ 0.34
NCLP19338 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NCLP19338 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NCLP19338 INTS4P2-202ENST00000614726 2019 ntBASIC17.2■□□□□ 0.34
NCLP19338 AC011498.7-201ENST00000624986 2027 ntBASIC17.2■□□□□ 0.34
NCLP19338 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NCLP19338 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 USP47-202ENST00000339865 7775 ntTSL 2 BASIC17.19■□□□□ 0.34
NCLP19338 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NCLP19338 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NCLP19338 HSPA8P5-201ENST00000456928 2069 ntBASIC17.19■□□□□ 0.34
NCLP19338 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NCLP19338 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC17.19■□□□□ 0.34
NCLP19338 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.19■□□□□ 0.34
NCLP19338 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC17.19■□□□□ 0.34
NCLP19338 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.19■□□□□ 0.34
NCLP19338 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NCLP19338 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NCLP19338 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.19■□□□□ 0.34
NCLP19338 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.19■□□□□ 0.34
NCLP19338 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NCLP19338 AC007969.1-201ENST00000433675 447 ntBASIC17.19■□□□□ 0.34
NCLP19338 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.19■□□□□ 0.34
NCLP19338 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms