Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CD74P04233 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.07□□□□□ -0.48
CD74P04233 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 AC211486.1-202ENST00000416371 468 ntBASIC12.07□□□□□ -0.48
CD74P04233 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.07□□□□□ -0.48
CD74P04233 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.07□□□□□ -0.48
CD74P04233 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 AC011495.1-201ENST00000498085 584 ntBASIC12.07□□□□□ -0.48
CD74P04233 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 AC211476.1-201ENST00000503899 468 ntBASIC12.07□□□□□ -0.48
CD74P04233 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.07□□□□□ -0.48
CD74P04233 AC068587.3-201ENST00000526613 355 ntBASIC12.07□□□□□ -0.48
CD74P04233 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.07□□□□□ -0.48
CD74P04233 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.07□□□□□ -0.48
CD74P04233 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CD74P04233 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.07□□□□□ -0.48
CD74P04233 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 AC005252.2-201ENST00000624630 1141 ntBASIC12.07□□□□□ -0.48
CD74P04233 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 AC002472.3-201ENST00000640124 621 ntBASIC12.07□□□□□ -0.48
CD74P04233 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 AC009093.2-202ENST00000620513 2079 ntBASIC12.07□□□□□ -0.48
CD74P04233 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.07□□□□□ -0.48
CD74P04233 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 RCC2P1-201ENST00000452257 1476 ntBASIC12.07□□□□□ -0.48
CD74P04233 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.07□□□□□ -0.48
CD74P04233 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CD74P04233 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
CD74P04233 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CD74P04233 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
CD74P04233 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.06□□□□□ -0.48
CD74P04233 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 SNORA50C-201ENST00000408535 133 ntBASIC12.06□□□□□ -0.48
CD74P04233 UPF3AP3-201ENST00000420996 769 ntBASIC12.06□□□□□ -0.48
CD74P04233 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 AC003958.1-201ENST00000435883 421 ntBASIC12.06□□□□□ -0.48
CD74P04233 AL391280.1-201ENST00000506969 1062 ntBASIC12.06□□□□□ -0.48
CD74P04233 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.06□□□□□ -0.48
CD74P04233 AL359711.2-201ENST00000563105 872 ntBASIC12.06□□□□□ -0.48
CD74P04233 AC104794.3-201ENST00000566840 1248 ntBASIC12.06□□□□□ -0.48
CD74P04233 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.06□□□□□ -0.48
CD74P04233 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.06□□□□□ -0.48
CD74P04233 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.06□□□□□ -0.48
CD74P04233 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CD74P04233 AC008761.3-201ENST00000624803 892 ntBASIC12.06□□□□□ -0.48
CD74P04233 SNORA50.1-201ENST00000628590 135 ntBASIC12.06□□□□□ -0.48
CD74P04233 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.06□□□□□ -0.48
CD74P04233 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.06□□□□□ -0.48
CD74P04233 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.06□□□□□ -0.48
CD74P04233 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CD74P04233 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
CD74P04233 AL358781.1-202ENST00000321081 1360 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms