Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
APOBP04114 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC8.52□□□□□ -1.05
APOBP04114 AC096677.3-201ENST00000413162 387 ntBASIC8.52□□□□□ -1.05
APOBP04114 PLAC9P1-203ENST00000440031 223 ntBASIC8.52□□□□□ -1.05
APOBP04114 AC113398.1-201ENST00000464124 406 ntBASIC8.52□□□□□ -1.05
APOBP04114 RN7SL363P-201ENST00000482412 273 ntBASIC8.52□□□□□ -1.05
APOBP04114 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC8.52□□□□□ -1.05
APOBP04114 MIR6819-201ENST00000622122 61 ntBASIC8.52□□□□□ -1.05
APOBP04114 AC137723.2-201ENST00000623540 398 ntBASIC8.52□□□□□ -1.05
APOBP04114 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 WARS-203ENST00000358655 2466 ntTSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 AC073347.1-201ENST00000421633 2643 ntBASIC8.52□□□□□ -1.05
APOBP04114 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 AC034205.3-201ENST00000603595 1376 ntBASIC8.52□□□□□ -1.05
APOBP04114 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
APOBP04114 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 BICD1P1-201ENST00000457832 1222 ntBASIC8.52□□□□□ -1.05
APOBP04114 METTL7AP1-201ENST00000547343 496 ntBASIC8.52□□□□□ -1.05
APOBP04114 MIR3940-201ENST00000579148 102 ntBASIC8.52□□□□□ -1.05
APOBP04114 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC8.52□□□□□ -1.05
APOBP04114 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC8.52□□□□□ -1.05
APOBP04114 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 GBAP1-208ENST00000566701 1546 ntBASIC8.52□□□□□ -1.05
APOBP04114 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
APOBP04114 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 LINC00552-201ENST00000625151 2579 ntBASIC8.52□□□□□ -1.05
APOBP04114 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
APOBP04114 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
APOBP04114 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 Z84721.1-201ENST00000438841 372 ntBASIC8.51□□□□□ -1.05
APOBP04114 KRT19P4-201ENST00000443208 943 ntBASIC8.51□□□□□ -1.05
APOBP04114 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC8.51□□□□□ -1.05
APOBP04114 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 HPD-204ENST00000543163 1709 ntTSL 5 BASIC8.51□□□□□ -1.05
APOBP04114 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 HNRNPA1P68-201ENST00000425806 979 ntBASIC8.51□□□□□ -1.05
APOBP04114 ATP5G1P7-201ENST00000444398 400 ntBASIC8.51□□□□□ -1.05
APOBP04114 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC8.51□□□□□ -1.05
APOBP04114 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC8.51□□□□□ -1.05
APOBP04114 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC8.51□□□□□ -1.05
APOBP04114 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
APOBP04114 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC8.51□□□□□ -1.05
APOBP04114 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
APOBP04114 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 AC253536.1-201ENST00000437021 315 ntBASIC8.51□□□□□ -1.05
APOBP04114 OR2A1-AS1-203ENST00000468575 568 ntBASIC8.51□□□□□ -1.05
APOBP04114 CAP2-207ENST00000493172 861 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC8.51□□□□□ -1.05
APOBP04114 RN7SL134P-201ENST00000579756 303 ntBASIC8.51□□□□□ -1.05
APOBP04114 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC8.51□□□□□ -1.05
APOBP04114 AP000553.2-201ENST00000609038 441 ntBASIC8.51□□□□□ -1.05
APOBP04114 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC8.51□□□□□ -1.05
APOBP04114 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
APOBP04114 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC8.51□□□□□ -1.05
APOBP04114 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
APOBP04114 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
APOBP04114 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC8.51□□□□□ -1.05
APOBP04114 CICP16-201ENST00000502609 2813 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms