Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LMNAP02545 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
LMNAP02545 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LMNAP02545 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LMNAP02545 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.1■□□□□ 0.01
LMNAP02545 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LMNAP02545 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
LMNAP02545 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.1■□□□□ 0.01
LMNAP02545 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.1■□□□□ 0.01
LMNAP02545 AL139094.1-201ENST00000405549 1188 ntBASIC15.1■□□□□ 0.01
LMNAP02545 GHSR-202ENST00000427970 912 ntBASIC15.1■□□□□ 0.01
LMNAP02545 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.1■□□□□ 0.01
LMNAP02545 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.1■□□□□ 0.01
LMNAP02545 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.1■□□□□ 0.01
LMNAP02545 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.1■□□□□ 0.01
LMNAP02545 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 RN7SL596P-201ENST00000582123 288 ntBASIC15.1■□□□□ 0.01
LMNAP02545 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.1■□□□□ 0.01
LMNAP02545 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.1■□□□□ 0.01
LMNAP02545 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.1■□□□□ 0.01
LMNAP02545 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LMNAP02545 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
LMNAP02545 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LMNAP02545 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.1■□□□□ 0.01
LMNAP02545 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LMNAP02545 MTHFR-210ENST00000641407 2387 ntBASIC15.1■□□□□ 0.01
LMNAP02545 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LMNAP02545 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.09■□□□□ 0.01
LMNAP02545 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.09■□□□□ 0.01
LMNAP02545 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.09■□□□□ 0.01
LMNAP02545 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LMNAP02545 AC015802.1-201ENST00000588104 1449 ntBASIC15.09■□□□□ 0.01
LMNAP02545 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.09■□□□□ 0.01
LMNAP02545 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LMNAP02545 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.09■□□□□ 0.01
LMNAP02545 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.09■□□□□ 0.01
LMNAP02545 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.09■□□□□ 0.01
LMNAP02545 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LMNAP02545 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
LMNAP02545 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.09■□□□□ 0.01
LMNAP02545 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.09■□□□□ 0.01
LMNAP02545 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.09■□□□□ 0.01
LMNAP02545 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.09■□□□□ 0.01
LMNAP02545 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LMNAP02545 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.09■□□□□ 0.01
LMNAP02545 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.09■□□□□ 0.01
LMNAP02545 DGAT2L7P-201ENST00000602462 744 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms