Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TIMP1P01033 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TIMP1P01033 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMP1P01033 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMP1P01033 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMP1P01033 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.14■□□□□ 0.01
TIMP1P01033 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMP1P01033 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TIMP1P01033 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TIMP1P01033 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 RNA5SP491-201ENST00000362936 118 ntBASIC15.14■□□□□ 0.01
TIMP1P01033 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC15.14■□□□□ 0.01
TIMP1P01033 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMP1P01033 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC15.14■□□□□ 0.01
TIMP1P01033 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC15.14■□□□□ 0.01
TIMP1P01033 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC15.14■□□□□ 0.01
TIMP1P01033 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.14■□□□□ 0.01
TIMP1P01033 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.14■□□□□ 0.01
TIMP1P01033 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC15.14■□□□□ 0.01
TIMP1P01033 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC15.14■□□□□ 0.01
TIMP1P01033 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.14■□□□□ 0.01
TIMP1P01033 AC068760.1-201ENST00000493579 1953 ntBASIC15.14■□□□□ 0.01
TIMP1P01033 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMP1P01033 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.14■□□□□ 0.01
TIMP1P01033 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.14■□□□□ 0.01
TIMP1P01033 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TIMP1P01033 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.13■□□□□ 0.01
TIMP1P01033 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMP1P01033 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TIMP1P01033 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.13■□□□□ 0.01
TIMP1P01033 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TIMP1P01033 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMP1P01033 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 KRT18P33-201ENST00000398525 1043 ntBASIC15.13■□□□□ 0.01
TIMP1P01033 GGTLC4P-201ENST00000402176 664 ntBASIC15.13■□□□□ 0.01
TIMP1P01033 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC15.13■□□□□ 0.01
TIMP1P01033 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMP1P01033 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMP1P01033 AC092910.2-201ENST00000491262 348 ntBASIC15.13■□□□□ 0.01
TIMP1P01033 AC008620.2-201ENST00000510294 1569 ntBASIC15.13■□□□□ 0.01
TIMP1P01033 LY6E-215ENST00000523847 427 ntTSL 3 BASIC15.13■□□□□ 0.01
TIMP1P01033 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMP1P01033 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 AJ011931.1-201ENST00000618749 2492 ntBASIC15.13■□□□□ 0.01
TIMP1P01033 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMP1P01033 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMP1P01033 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMP1P01033 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.13■□□□□ 0.01
TIMP1P01033 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.13■□□□□ 0.01
TIMP1P01033 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TIMP1P01033 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.12■□□□□ 0.01
TIMP1P01033 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC15.12■□□□□ 0.01
TIMP1P01033 AL022313.4-201ENST00000562756 2046 ntBASIC15.12■□□□□ 0.01
TIMP1P01033 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
TIMP1P01033 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.12■□□□□ 0.01
TIMP1P01033 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TIMP1P01033 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC15.12■□□□□ 0.01
TIMP1P01033 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.12■□□□□ 0.01
TIMP1P01033 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TIMP1P01033 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.12■□□□□ 0.01
TIMP1P01033 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC15.12■□□□□ 0.01
TIMP1P01033 KRT18P44-201ENST00000416086 1285 ntBASIC15.12■□□□□ 0.01
TIMP1P01033 PHBP10-201ENST00000416467 784 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms