Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CNOT4O95628 AC005912.2-201ENST00000619492 2400 ntBASIC12.83□□□□□ -0.36
CNOT4O95628 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CNOT4O95628 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.83□□□□□ -0.36
CNOT4O95628 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.83□□□□□ -0.36
CNOT4O95628 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CNOT4O95628 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CNOT4O95628 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.83□□□□□ -0.36
CNOT4O95628 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CNOT4O95628 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
CNOT4O95628 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CNOT4O95628 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.82□□□□□ -0.36
CNOT4O95628 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 CYP4F23P-201ENST00000593402 1579 ntBASIC12.82□□□□□ -0.36
CNOT4O95628 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CNOT4O95628 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CNOT4O95628 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CNOT4O95628 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.82□□□□□ -0.36
CNOT4O95628 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.82□□□□□ -0.36
CNOT4O95628 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CNOT4O95628 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 AC253536.4-201ENST00000440539 267 ntBASIC12.82□□□□□ -0.36
CNOT4O95628 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.82□□□□□ -0.36
CNOT4O95628 AC006335.1-201ENST00000445200 547 ntBASIC12.82□□□□□ -0.36
CNOT4O95628 SPTLC1P5-201ENST00000450718 252 ntBASIC12.82□□□□□ -0.36
CNOT4O95628 LDHBP1-201ENST00000455730 1119 ntBASIC12.82□□□□□ -0.36
CNOT4O95628 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 RN7SL11P-201ENST00000471305 293 ntBASIC12.82□□□□□ -0.36
CNOT4O95628 RCC2P8-201ENST00000502779 1035 ntBASIC12.82□□□□□ -0.36
CNOT4O95628 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.82□□□□□ -0.36
CNOT4O95628 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.82□□□□□ -0.36
CNOT4O95628 SPCS2P2-201ENST00000603270 608 ntBASIC12.82□□□□□ -0.36
CNOT4O95628 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CNOT4O95628 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.82□□□□□ -0.36
CNOT4O95628 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.82□□□□□ -0.36
CNOT4O95628 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CNOT4O95628 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CNOT4O95628 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CNOT4O95628 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.81□□□□□ -0.36
CNOT4O95628 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms