Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 SOCS2P1-201ENST00000417727 557 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 EIF3FP3-201ENST00000434851 1086 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AC093726.1-201ENST00000608064 963 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 MIR8072-201ENST00000614241 80 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 POM121L14P-201ENST00000406100 1558 ntBASIC15.65■□□□□ 0.1
CCDC66A2RUB6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CCDC66A2RUB6 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CCDC66A2RUB6 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 GNAQP1-201ENST00000444815 1067 ntBASIC15.64■□□□□ 0.09
CCDC66A2RUB6 INGX-202ENST00000489074 768 ntBASIC15.64■□□□□ 0.09
CCDC66A2RUB6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 AP005019.2-201ENST00000615104 511 ntBASIC15.64■□□□□ 0.09
CCDC66A2RUB6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 AC022497.1-201ENST00000624916 3691 ntBASIC15.64■□□□□ 0.09
CCDC66A2RUB6 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC66A2RUB6 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 LRRC59-203ENST00000576448 1531 ntBASIC15.63■□□□□ 0.09
CCDC66A2RUB6 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AL136172.1-201ENST00000598590 1394 ntBASIC15.63■□□□□ 0.09
CCDC66A2RUB6 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC66A2RUB6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms