Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGB3Q9Y5G1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGB3Q9Y5G1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGB3Q9Y5G1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGB3Q9Y5G1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHGB3Q9Y5G1 AC137630.3-201ENST00000607245 391 ntBASIC21.33■■□□□ 1.01
PCDHGB3Q9Y5G1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHGB3Q9Y5G1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGB3Q9Y5G1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHGB3Q9Y5G1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 KRT125P-201ENST00000546827 989 ntBASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGB3Q9Y5G1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGB3Q9Y5G1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB3Q9Y5G1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB3Q9Y5G1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB3Q9Y5G1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB3Q9Y5G1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.3■■□□□ 1
PCDHGB3Q9Y5G1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGB3Q9Y5G1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDHGB3Q9Y5G1 AL117328.2-201ENST00000624617 1940 ntBASIC21.29■■□□□ 1
PCDHGB3Q9Y5G1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDHGB3Q9Y5G1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGB3Q9Y5G1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.29■■□□□ 1
PCDHGB3Q9Y5G1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB3Q9Y5G1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHGB3Q9Y5G1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB3Q9Y5G1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB3Q9Y5G1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGB3Q9Y5G1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGB3Q9Y5G1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 AC131274.2-201ENST00000580697 1507 ntBASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB3Q9Y5G1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.27■□□□□ 0.99
PCDHGB3Q9Y5G1 AF131216.4-201ENST00000638924 1588 ntBASIC21.27■□□□□ 0.99
PCDHGB3Q9Y5G1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGB3Q9Y5G1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PCDHGB3Q9Y5G1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGB3Q9Y5G1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PCDHGB3Q9Y5G1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB3Q9Y5G1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHGB3Q9Y5G1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGB3Q9Y5G1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
PCDHGB3Q9Y5G1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PCDHGB3Q9Y5G1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB3Q9Y5G1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 AL356441.2-201ENST00000443009 864 ntBASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 MIR4787-201ENST00000607364 84 ntBASIC21.25■□□□□ 0.99
PCDHGB3Q9Y5G1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms