Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.79■■□□□ 1.4
YIPF1Q9Y548 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
YIPF1Q9Y548 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
YIPF1Q9Y548 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
YIPF1Q9Y548 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
YIPF1Q9Y548 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
YIPF1Q9Y548 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.78■■□□□ 1.4
YIPF1Q9Y548 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
YIPF1Q9Y548 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
YIPF1Q9Y548 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
YIPF1Q9Y548 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.78■■□□□ 1.4
YIPF1Q9Y548 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.78■■□□□ 1.4
YIPF1Q9Y548 pRNA.6-201ENST00000610482 90 ntBASIC23.78■■□□□ 1.4
YIPF1Q9Y548 pRNA.5-201ENST00000612139 90 ntBASIC23.78■■□□□ 1.4
YIPF1Q9Y548 pRNA.11-201ENST00000618423 90 ntBASIC23.78■■□□□ 1.4
YIPF1Q9Y548 pRNA.13-201ENST00000619112 90 ntBASIC23.78■■□□□ 1.4
YIPF1Q9Y548 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
YIPF1Q9Y548 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
YIPF1Q9Y548 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
YIPF1Q9Y548 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
YIPF1Q9Y548 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.77■■□□□ 1.4
YIPF1Q9Y548 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
YIPF1Q9Y548 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.77■■□□□ 1.4
YIPF1Q9Y548 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
YIPF1Q9Y548 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
YIPF1Q9Y548 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 AC141586.4-201ENST00000624558 1573 ntBASIC23.76■■□□□ 1.39
YIPF1Q9Y548 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
YIPF1Q9Y548 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.75■■□□□ 1.39
YIPF1Q9Y548 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.75■■□□□ 1.39
YIPF1Q9Y548 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
YIPF1Q9Y548 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
YIPF1Q9Y548 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
YIPF1Q9Y548 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
YIPF1Q9Y548 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.74■■□□□ 1.39
YIPF1Q9Y548 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.74■■□□□ 1.39
YIPF1Q9Y548 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
YIPF1Q9Y548 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
YIPF1Q9Y548 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
YIPF1Q9Y548 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
YIPF1Q9Y548 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
YIPF1Q9Y548 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
YIPF1Q9Y548 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.73■■□□□ 1.39
YIPF1Q9Y548 BX842568.3-201ENST00000418104 571 ntBASIC23.73■■□□□ 1.39
YIPF1Q9Y548 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
YIPF1Q9Y548 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
YIPF1Q9Y548 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
YIPF1Q9Y548 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
YIPF1Q9Y548 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.73■■□□□ 1.39
YIPF1Q9Y548 AC020928.2-201ENST00000588717 2197 ntBASIC23.72■■□□□ 1.39
YIPF1Q9Y548 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.72■■□□□ 1.39
YIPF1Q9Y548 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.72■■□□□ 1.39
YIPF1Q9Y548 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.72■■□□□ 1.39
YIPF1Q9Y548 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
YIPF1Q9Y548 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.72■■□□□ 1.39
YIPF1Q9Y548 AC233992.3-201ENST00000607491 485 ntBASIC23.72■■□□□ 1.39
YIPF1Q9Y548 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
YIPF1Q9Y548 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
YIPF1Q9Y548 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
YIPF1Q9Y548 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
YIPF1Q9Y548 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.7■■□□□ 1.39
YIPF1Q9Y548 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.7■■□□□ 1.39
YIPF1Q9Y548 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
YIPF1Q9Y548 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
YIPF1Q9Y548 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.7■■□□□ 1.38
YIPF1Q9Y548 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.7■■□□□ 1.38
YIPF1Q9Y548 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
YIPF1Q9Y548 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.69■■□□□ 1.38
YIPF1Q9Y548 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
YIPF1Q9Y548 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
YIPF1Q9Y548 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
YIPF1Q9Y548 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
YIPF1Q9Y548 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms