Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AC096631.2-201ENST00000436136 790 ntBASIC25.5■■□□□ 1.67
KDM3AQ9Y4C1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.5■■□□□ 1.67
KDM3AQ9Y4C1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.5■■□□□ 1.67
KDM3AQ9Y4C1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
KDM3AQ9Y4C1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
KDM3AQ9Y4C1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
KDM3AQ9Y4C1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 AC133561.4-201ENST00000566112 224 ntBASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
KDM3AQ9Y4C1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KDM3AQ9Y4C1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
KDM3AQ9Y4C1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.48■■□□□ 1.67
KDM3AQ9Y4C1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
KDM3AQ9Y4C1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.48■■□□□ 1.67
KDM3AQ9Y4C1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
KDM3AQ9Y4C1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
KDM3AQ9Y4C1 AC005703.6-201ENST00000623265 1329 ntBASIC25.46■■□□□ 1.67
KDM3AQ9Y4C1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
KDM3AQ9Y4C1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.46■■□□□ 1.67
KDM3AQ9Y4C1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
KDM3AQ9Y4C1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
KDM3AQ9Y4C1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
KDM3AQ9Y4C1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.45■■□□□ 1.66
KDM3AQ9Y4C1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.45■■□□□ 1.66
KDM3AQ9Y4C1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
KDM3AQ9Y4C1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.45■■□□□ 1.66
KDM3AQ9Y4C1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
KDM3AQ9Y4C1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
KDM3AQ9Y4C1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
KDM3AQ9Y4C1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.44■■□□□ 1.66
KDM3AQ9Y4C1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
KDM3AQ9Y4C1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.44■■□□□ 1.66
KDM3AQ9Y4C1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
KDM3AQ9Y4C1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
KDM3AQ9Y4C1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
KDM3AQ9Y4C1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KDM3AQ9Y4C1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KDM3AQ9Y4C1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.43■■□□□ 1.66
KDM3AQ9Y4C1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.43■■□□□ 1.66
KDM3AQ9Y4C1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
KDM3AQ9Y4C1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 AC005837.3-201ENST00000612163 286 ntBASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.42■■□□□ 1.66
KDM3AQ9Y4C1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
KDM3AQ9Y4C1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
KDM3AQ9Y4C1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3AQ9Y4C1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.41■■□□□ 1.66
KDM3AQ9Y4C1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KDM3AQ9Y4C1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.41■■□□□ 1.66
KDM3AQ9Y4C1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.41■■□□□ 1.66
KDM3AQ9Y4C1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
KDM3AQ9Y4C1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.41■■□□□ 1.66
KDM3AQ9Y4C1 MIR935-201ENST00000401179 91 ntBASIC25.4■■□□□ 1.66
KDM3AQ9Y4C1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.4■■□□□ 1.66
KDM3AQ9Y4C1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KDM3AQ9Y4C1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.4■■□□□ 1.66
KDM3AQ9Y4C1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.4■■□□□ 1.66
KDM3AQ9Y4C1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.4■■□□□ 1.66
KDM3AQ9Y4C1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
KDM3AQ9Y4C1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
KDM3AQ9Y4C1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KDM3AQ9Y4C1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KDM3AQ9Y4C1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
KDM3AQ9Y4C1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
KDM3AQ9Y4C1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.39■■□□□ 1.66
KDM3AQ9Y4C1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KDM3AQ9Y4C1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.39■■□□□ 1.65
KDM3AQ9Y4C1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
KDM3AQ9Y4C1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
KDM3AQ9Y4C1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.38■■□□□ 1.65
KDM3AQ9Y4C1 AC106739.1-201ENST00000617035 715 ntBASIC25.38■■□□□ 1.65
KDM3AQ9Y4C1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms