Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 ALDH1A3-203ENST00000557963 1670 ntBASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 AC087393.1-201ENST00000582896 145 ntBASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.71■□□□□ 0.11
UBE2D4Q9Y2X8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBE2D4Q9Y2X8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBE2D4Q9Y2X8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBE2D4Q9Y2X8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBE2D4Q9Y2X8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 AC137767.1-201ENST00000602918 1920 ntBASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2D4Q9Y2X8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2D4Q9Y2X8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 AC242852.2-201ENST00000615738 1807 ntBASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 ESRRAP2-201ENST00000418437 1549 ntBASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UBE2D4Q9Y2X8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 SPCS2P3-201ENST00000500401 656 ntBASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 AC131274.2-201ENST00000580697 1507 ntBASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2D4Q9Y2X8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2D4Q9Y2X8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2D4Q9Y2X8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2D4Q9Y2X8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2D4Q9Y2X8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2D4Q9Y2X8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2D4Q9Y2X8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2D4Q9Y2X8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.66■□□□□ 0.1
UBE2D4Q9Y2X8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2D4Q9Y2X8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2D4Q9Y2X8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2D4Q9Y2X8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2D4Q9Y2X8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBE2D4Q9Y2X8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.65■□□□□ 0.1
UBE2D4Q9Y2X8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
UBE2D4Q9Y2X8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
UBE2D4Q9Y2X8 AL592293.1-201ENST00000502889 1188 ntBASIC15.65■□□□□ 0.1
UBE2D4Q9Y2X8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms