Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CPSF2Q9P2I0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CPSF2Q9P2I0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPSF2Q9P2I0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.58■■□□□ 1.2
CPSF2Q9P2I0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPSF2Q9P2I0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CPSF2Q9P2I0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.58■■□□□ 1.2
CPSF2Q9P2I0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CPSF2Q9P2I0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF2Q9P2I0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF2Q9P2I0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.56■■□□□ 1.2
CPSF2Q9P2I0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.56■■□□□ 1.2
CPSF2Q9P2I0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CPSF2Q9P2I0 DUX4L18-201ENST00000553347 1267 ntBASIC22.56■■□□□ 1.2
CPSF2Q9P2I0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CPSF2Q9P2I0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 ABHD17AP5-201ENST00000580133 923 ntBASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.55■■□□□ 1.2
CPSF2Q9P2I0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 AC139795.1-202ENST00000500444 432 ntBASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 AL161729.1-201ENST00000604104 1402 ntBASIC22.54■■□□□ 1.2
CPSF2Q9P2I0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CPSF2Q9P2I0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPSF2Q9P2I0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CPSF2Q9P2I0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.53■■□□□ 1.2
CPSF2Q9P2I0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.53■■□□□ 1.2
CPSF2Q9P2I0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPSF2Q9P2I0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPSF2Q9P2I0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPSF2Q9P2I0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CPSF2Q9P2I0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.52■■□□□ 1.2
CPSF2Q9P2I0 AL022069.1-201ENST00000568025 1636 ntBASIC22.52■■□□□ 1.2
CPSF2Q9P2I0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CPSF2Q9P2I0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.52■■□□□ 1.19
CPSF2Q9P2I0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 NTF6A-201ENST00000591175 560 ntBASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CPSF2Q9P2I0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPSF2Q9P2I0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPSF2Q9P2I0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.5■■□□□ 1.19
CPSF2Q9P2I0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CPSF2Q9P2I0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms