Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.07■□□□□ 0.64
HES4Q9HCC6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.07■□□□□ 0.64
HES4Q9HCC6 AC092028.1-203ENST00000608262 953 ntBASIC19.07■□□□□ 0.64
HES4Q9HCC6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HES4Q9HCC6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
HES4Q9HCC6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.07■□□□□ 0.64
HES4Q9HCC6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.07■□□□□ 0.64
HES4Q9HCC6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HES4Q9HCC6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HES4Q9HCC6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
HES4Q9HCC6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HES4Q9HCC6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.06■□□□□ 0.64
HES4Q9HCC6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.06■□□□□ 0.64
HES4Q9HCC6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.06■□□□□ 0.64
HES4Q9HCC6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.06■□□□□ 0.64
HES4Q9HCC6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HES4Q9HCC6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.06■□□□□ 0.64
HES4Q9HCC6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.06■□□□□ 0.64
HES4Q9HCC6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HES4Q9HCC6 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.06■□□□□ 0.64
HES4Q9HCC6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HES4Q9HCC6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HES4Q9HCC6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.05■□□□□ 0.64
HES4Q9HCC6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HES4Q9HCC6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HES4Q9HCC6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.05■□□□□ 0.64
HES4Q9HCC6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HES4Q9HCC6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HES4Q9HCC6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.05■□□□□ 0.64
HES4Q9HCC6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.05■□□□□ 0.64
HES4Q9HCC6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HES4Q9HCC6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HES4Q9HCC6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HES4Q9HCC6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HES4Q9HCC6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HES4Q9HCC6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HES4Q9HCC6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.05■□□□□ 0.64
HES4Q9HCC6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
HES4Q9HCC6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HES4Q9HCC6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HES4Q9HCC6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
HES4Q9HCC6 AC239859.2-201ENST00000444165 318 ntBASIC19.04■□□□□ 0.64
HES4Q9HCC6 MIR4787-201ENST00000607364 84 ntBASIC19.04■□□□□ 0.64
HES4Q9HCC6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HES4Q9HCC6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HES4Q9HCC6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HES4Q9HCC6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.04■□□□□ 0.64
HES4Q9HCC6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
HES4Q9HCC6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HES4Q9HCC6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HES4Q9HCC6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HES4Q9HCC6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HES4Q9HCC6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HES4Q9HCC6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HES4Q9HCC6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.03■□□□□ 0.64
HES4Q9HCC6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.03■□□□□ 0.64
HES4Q9HCC6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.03■□□□□ 0.64
HES4Q9HCC6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HES4Q9HCC6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HES4Q9HCC6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.02■□□□□ 0.64
HES4Q9HCC6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HES4Q9HCC6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HES4Q9HCC6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.02■□□□□ 0.64
HES4Q9HCC6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HES4Q9HCC6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HES4Q9HCC6 DUSP8P3-201ENST00000399571 1760 ntBASIC19.02■□□□□ 0.64
HES4Q9HCC6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HES4Q9HCC6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HES4Q9HCC6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.02■□□□□ 0.64
HES4Q9HCC6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HES4Q9HCC6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HES4Q9HCC6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HES4Q9HCC6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HES4Q9HCC6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.02■□□□□ 0.63
HES4Q9HCC6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.01■□□□□ 0.63
HES4Q9HCC6 AC005703.6-201ENST00000623265 1329 ntBASIC19.01■□□□□ 0.63
HES4Q9HCC6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.01■□□□□ 0.63
HES4Q9HCC6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HES4Q9HCC6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HES4Q9HCC6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HES4Q9HCC6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19■□□□□ 0.63
HES4Q9HCC6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19■□□□□ 0.63
HES4Q9HCC6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19■□□□□ 0.63
HES4Q9HCC6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HES4Q9HCC6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19■□□□□ 0.63
HES4Q9HCC6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HES4Q9HCC6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms