Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 AL022069.1-201ENST00000568025 1636 ntBASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF556Q9HAH1 LINC00526-201ENST00000581067 1875 ntBASIC20.84■□□□□ 0.93
ZNF556Q9HAH1 AL592295.1-201ENST00000400984 884 ntBASIC20.84■□□□□ 0.93
ZNF556Q9HAH1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF556Q9HAH1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF556Q9HAH1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNF556Q9HAH1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF556Q9HAH1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF556Q9HAH1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ZNF556Q9HAH1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF556Q9HAH1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF556Q9HAH1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF556Q9HAH1 RPS2P7-201ENST00000447334 885 ntBASIC20.83■□□□□ 0.93
ZNF556Q9HAH1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ZNF556Q9HAH1 MIR7108-201ENST00000614319 87 ntBASIC20.83■□□□□ 0.93
ZNF556Q9HAH1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF556Q9HAH1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF556Q9HAH1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 AC127496.7-201ENST00000625110 1798 ntBASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ZNF556Q9HAH1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ZNF556Q9HAH1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 AC018755.3-202ENST00000596210 929 ntBASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 AC133552.2-201ENST00000619106 1032 ntBASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF556Q9HAH1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 ECEL1P1-201ENST00000373592 1742 ntBASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 AC009831.1-201ENST00000580420 1582 ntBASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF556Q9HAH1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF556Q9HAH1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms