Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZCCHC4Q9H5U6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZCCHC4Q9H5U6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZCCHC4Q9H5U6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC4Q9H5U6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 LONRF2P2-201ENST00000439212 571 ntBASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ZCCHC4Q9H5U6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.77■□□□□ 0.76
ZCCHC4Q9H5U6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
ZCCHC4Q9H5U6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZCCHC4Q9H5U6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ZCCHC4Q9H5U6 RARRES2P2-201ENST00000394842 485 ntBASIC19.77■□□□□ 0.76
ZCCHC4Q9H5U6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZCCHC4Q9H5U6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZCCHC4Q9H5U6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZCCHC4Q9H5U6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
ZCCHC4Q9H5U6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 ESRRAP2-201ENST00000418437 1549 ntBASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 AC242852.2-201ENST00000615738 1807 ntBASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC4Q9H5U6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 AL022069.1-201ENST00000568025 1636 ntBASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.75■□□□□ 0.75
ZCCHC4Q9H5U6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZCCHC4Q9H5U6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms