Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.34□□□□□ -0.27
CYSTM1Q9H1C7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CYSTM1Q9H1C7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
CYSTM1Q9H1C7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CYSTM1Q9H1C7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.33□□□□□ -0.27
CYSTM1Q9H1C7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CYSTM1Q9H1C7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.33□□□□□ -0.28
CYSTM1Q9H1C7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CYSTM1Q9H1C7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 AC242852.2-201ENST00000615738 1807 ntBASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CYSTM1Q9H1C7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CYSTM1Q9H1C7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 LTB4R2-202ENST00000528054 3092 ntBASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CYSTM1Q9H1C7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CYSTM1Q9H1C7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms