Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF1Q9BSM1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF1Q9BSM1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF1Q9BSM1 AC005703.6-201ENST00000623265 1329 ntBASIC18.82■□□□□ 0.6
PCGF1Q9BSM1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
PCGF1Q9BSM1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF1Q9BSM1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF1Q9BSM1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.82■□□□□ 0.6
PCGF1Q9BSM1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF1Q9BSM1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.82■□□□□ 0.6
PCGF1Q9BSM1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF1Q9BSM1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCGF1Q9BSM1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 AC068473.5-201ENST00000616428 2072 ntBASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.81■□□□□ 0.6
PCGF1Q9BSM1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.8■□□□□ 0.6
PCGF1Q9BSM1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
PCGF1Q9BSM1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCGF1Q9BSM1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCGF1Q9BSM1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.8■□□□□ 0.6
PCGF1Q9BSM1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.8■□□□□ 0.6
PCGF1Q9BSM1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PCGF1Q9BSM1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF1Q9BSM1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF1Q9BSM1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCGF1Q9BSM1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF1Q9BSM1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF1Q9BSM1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF1Q9BSM1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.79■□□□□ 0.6
PCGF1Q9BSM1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.79■□□□□ 0.6
PCGF1Q9BSM1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 MIR4466-201ENST00000606121 54 ntBASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCGF1Q9BSM1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 AL161729.1-201ENST00000604104 1402 ntBASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF1Q9BSM1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCGF1Q9BSM1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 AL512631.2-201ENST00000604634 923 ntBASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF1Q9BSM1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
PCGF1Q9BSM1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.74■□□□□ 0.59
PCGF1Q9BSM1 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.74■□□□□ 0.59
PCGF1Q9BSM1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms