Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
MUC4Q99102 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MUC4Q99102 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MUC4Q99102 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
MUC4Q99102 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MUC4Q99102 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MUC4Q99102 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MUC4Q99102 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MUC4Q99102 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MUC4Q99102 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.46■□□□□ 0.23
MUC4Q99102 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MUC4Q99102 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MUC4Q99102 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MUC4Q99102 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.46■□□□□ 0.22
MUC4Q99102 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
MUC4Q99102 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.45■□□□□ 0.22
MUC4Q99102 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.45■□□□□ 0.22
MUC4Q99102 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.45■□□□□ 0.22
MUC4Q99102 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.45■□□□□ 0.22
MUC4Q99102 AC079834.2-201ENST00000609776 1949 ntBASIC16.45■□□□□ 0.22
MUC4Q99102 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MUC4Q99102 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.45■□□□□ 0.22
MUC4Q99102 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
MUC4Q99102 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MUC4Q99102 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
MUC4Q99102 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MUC4Q99102 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MUC4Q99102 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MUC4Q99102 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MUC4Q99102 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MUC4Q99102 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.44■□□□□ 0.22
MUC4Q99102 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.44■□□□□ 0.22
MUC4Q99102 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.44■□□□□ 0.22
MUC4Q99102 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MUC4Q99102 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MUC4Q99102 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MUC4Q99102 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MUC4Q99102 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.43■□□□□ 0.22
MUC4Q99102 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MUC4Q99102 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MUC4Q99102 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MUC4Q99102 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MUC4Q99102 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.43■□□□□ 0.22
MUC4Q99102 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.43■□□□□ 0.22
MUC4Q99102 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MUC4Q99102 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.43■□□□□ 0.22
MUC4Q99102 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MUC4Q99102 KRT18P24-201ENST00000344739 1156 ntBASIC16.43■□□□□ 0.22
MUC4Q99102 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MUC4Q99102 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MUC4Q99102 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.43■□□□□ 0.22
MUC4Q99102 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MUC4Q99102 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.42■□□□□ 0.22
MUC4Q99102 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MUC4Q99102 AC079630.1-202ENST00000618127 1840 ntBASIC16.42■□□□□ 0.22
MUC4Q99102 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MUC4Q99102 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.42■□□□□ 0.22
MUC4Q99102 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.42■□□□□ 0.22
MUC4Q99102 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.42■□□□□ 0.22
MUC4Q99102 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MUC4Q99102 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MUC4Q99102 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MUC4Q99102 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MUC4Q99102 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MUC4Q99102 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.41■□□□□ 0.22
MUC4Q99102 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.41■□□□□ 0.22
MUC4Q99102 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.41■□□□□ 0.22
MUC4Q99102 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.41■□□□□ 0.22
MUC4Q99102 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MUC4Q99102 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MUC4Q99102 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MUC4Q99102 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MUC4Q99102 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.41■□□□□ 0.22
MUC4Q99102 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
MUC4Q99102 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.41■□□□□ 0.22
MUC4Q99102 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MUC4Q99102 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MUC4Q99102 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.41■□□□□ 0.22
MUC4Q99102 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MUC4Q99102 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MUC4Q99102 AF131216.4-201ENST00000638924 1588 ntBASIC16.41■□□□□ 0.22
MUC4Q99102 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MUC4Q99102 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MUC4Q99102 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms