Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.04■■□□□ 1.44
PCDHB18PQ96TA0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB18PQ96TA0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB18PQ96TA0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB18PQ96TA0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB18PQ96TA0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHB18PQ96TA0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHB18PQ96TA0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 AC079630.1-202ENST00000618127 1840 ntBASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
PCDHB18PQ96TA0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHB18PQ96TA0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB18PQ96TA0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB18PQ96TA0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB18PQ96TA0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB18PQ96TA0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHB18PQ96TA0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHB18PQ96TA0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB18PQ96TA0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 BX664725.1-201ENST00000438252 379 ntBASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB18PQ96TA0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB18PQ96TA0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB18PQ96TA0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB18PQ96TA0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB18PQ96TA0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB18PQ96TA0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHB18PQ96TA0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHB18PQ96TA0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHB18PQ96TA0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PCDHB18PQ96TA0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms