Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
NBPF4Q96M43 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
NBPF4Q96M43 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC30.09■■■□□ 2.41
NBPF4Q96M43 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
NBPF4Q96M43 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC30.08■■■□□ 2.41
NBPF4Q96M43 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NBPF4Q96M43 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NBPF4Q96M43 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.08■■■□□ 2.41
NBPF4Q96M43 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NBPF4Q96M43 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.08■■■□□ 2.41
NBPF4Q96M43 AC022211.4-201ENST00000625094 2161 ntBASIC30.08■■■□□ 2.41
NBPF4Q96M43 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
NBPF4Q96M43 ASB1-202ENST00000409297 878 ntTSL 5 BASIC30.07■■■□□ 2.4
NBPF4Q96M43 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
NBPF4Q96M43 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NBPF4Q96M43 SLC47A1P1-202ENST00000449666 945 ntBASIC30.06■■■□□ 2.4
NBPF4Q96M43 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.06■■■□□ 2.4
NBPF4Q96M43 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC30.06■■■□□ 2.4
NBPF4Q96M43 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
NBPF4Q96M43 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.06■■■□□ 2.4
NBPF4Q96M43 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
NBPF4Q96M43 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NBPF4Q96M43 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.05■■■□□ 2.4
NBPF4Q96M43 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
NBPF4Q96M43 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
NBPF4Q96M43 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
NBPF4Q96M43 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.05■■■□□ 2.4
NBPF4Q96M43 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.05■■■□□ 2.4
NBPF4Q96M43 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.05■■■□□ 2.4
NBPF4Q96M43 AC141586.4-201ENST00000624558 1573 ntBASIC30.05■■■□□ 2.4
NBPF4Q96M43 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.05■■■□□ 2.4
NBPF4Q96M43 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
NBPF4Q96M43 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
NBPF4Q96M43 TMEM202-AS1-202ENST00000565181 2325 ntBASIC30.04■■■□□ 2.4
NBPF4Q96M43 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.04■■■□□ 2.4
NBPF4Q96M43 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NBPF4Q96M43 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.04■■■□□ 2.4
NBPF4Q96M43 AL031602.1-201ENST00000633169 911 ntBASIC30.04■■■□□ 2.4
NBPF4Q96M43 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NBPF4Q96M43 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NBPF4Q96M43 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NBPF4Q96M43 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NBPF4Q96M43 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC30.03■■■□□ 2.4
NBPF4Q96M43 AC126544.1-201ENST00000580842 1059 ntBASIC30.03■■■□□ 2.4
NBPF4Q96M43 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.03■■■□□ 2.4
NBPF4Q96M43 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
NBPF4Q96M43 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.02■■■□□ 2.4
NBPF4Q96M43 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
NBPF4Q96M43 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.02■■■□□ 2.4
NBPF4Q96M43 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
NBPF4Q96M43 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.02■■■□□ 2.4
NBPF4Q96M43 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.02■■■□□ 2.4
NBPF4Q96M43 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
NBPF4Q96M43 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NBPF4Q96M43 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
NBPF4Q96M43 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC30.01■■■□□ 2.39
NBPF4Q96M43 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
NBPF4Q96M43 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30■■■□□ 2.39
NBPF4Q96M43 TSPY26P-201ENST00000476365 1326 ntBASIC30■■■□□ 2.39
NBPF4Q96M43 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30■■■□□ 2.39
NBPF4Q96M43 HACD1-201ENST00000326961 773 ntTSL 2 BASIC30■■■□□ 2.39
NBPF4Q96M43 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30■■■□□ 2.39
NBPF4Q96M43 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30■■■□□ 2.39
NBPF4Q96M43 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
NBPF4Q96M43 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
NBPF4Q96M43 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.99■■■□□ 2.39
NBPF4Q96M43 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.99■■■□□ 2.39
NBPF4Q96M43 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.99■■■□□ 2.39
NBPF4Q96M43 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
NBPF4Q96M43 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
NBPF4Q96M43 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
NBPF4Q96M43 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
NBPF4Q96M43 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.98■■■□□ 2.39
NBPF4Q96M43 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
NBPF4Q96M43 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.98■■■□□ 2.39
NBPF4Q96M43 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
NBPF4Q96M43 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.98■■■□□ 2.39
NBPF4Q96M43 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.97■■■□□ 2.39
NBPF4Q96M43 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
NBPF4Q96M43 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
NBPF4Q96M43 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
NBPF4Q96M43 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC29.97■■■□□ 2.39
NBPF4Q96M43 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.97■■■□□ 2.39
NBPF4Q96M43 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
NBPF4Q96M43 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
NBPF4Q96M43 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
NBPF4Q96M43 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
NBPF4Q96M43 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
NBPF4Q96M43 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.96■■■□□ 2.39
NBPF4Q96M43 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC29.96■■■□□ 2.39
NBPF4Q96M43 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
NBPF4Q96M43 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
NBPF4Q96M43 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.95■■■□□ 2.39
NBPF4Q96M43 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
NBPF4Q96M43 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC29.95■■■□□ 2.39
NBPF4Q96M43 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
NBPF4Q96M43 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC29.95■■■□□ 2.39
NBPF4Q96M43 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
NBPF4Q96M43 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
NBPF4Q96M43 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms