Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HPS1Q92902 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HPS1Q92902 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HPS1Q92902 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.39■□□□□ 0.86
HPS1Q92902 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HPS1Q92902 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
HPS1Q92902 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HPS1Q92902 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS1Q92902 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS1Q92902 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS1Q92902 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.39■□□□□ 0.85
HPS1Q92902 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.39■□□□□ 0.85
HPS1Q92902 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS1Q92902 AL035685.1-201ENST00000636663 812 ntBASIC20.39■□□□□ 0.85
HPS1Q92902 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.39■□□□□ 0.85
HPS1Q92902 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS1Q92902 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.39■□□□□ 0.85
HPS1Q92902 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HPS1Q92902 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HPS1Q92902 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HPS1Q92902 DUSP8P3-201ENST00000399571 1760 ntBASIC20.39■□□□□ 0.85
HPS1Q92902 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS1Q92902 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.38■□□□□ 0.85
HPS1Q92902 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS1Q92902 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HPS1Q92902 KRT18P10-201ENST00000388836 1287 ntBASIC20.38■□□□□ 0.85
HPS1Q92902 AC010980.1-201ENST00000587192 1142 ntBASIC20.38■□□□□ 0.85
HPS1Q92902 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HPS1Q92902 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.38■□□□□ 0.85
HPS1Q92902 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HPS1Q92902 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS1Q92902 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS1Q92902 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
HPS1Q92902 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HPS1Q92902 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HPS1Q92902 YBX1P4-201ENST00000392794 808 ntBASIC20.37■□□□□ 0.85
HPS1Q92902 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HPS1Q92902 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HPS1Q92902 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.37■□□□□ 0.85
HPS1Q92902 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS1Q92902 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HPS1Q92902 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HPS1Q92902 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS1Q92902 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS1Q92902 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HPS1Q92902 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS1Q92902 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS1Q92902 AL451085.2-201ENST00000605085 799 ntBASIC20.36■□□□□ 0.85
HPS1Q92902 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
HPS1Q92902 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.36■□□□□ 0.85
HPS1Q92902 AC004812.2-201ENST00000611079 2094 ntBASIC20.36■□□□□ 0.85
HPS1Q92902 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
HPS1Q92902 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS1Q92902 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HPS1Q92902 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HPS1Q92902 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HPS1Q92902 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 AC092667.1-201ENST00000434301 2586 ntBASIC20.35■□□□□ 0.85
HPS1Q92902 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HPS1Q92902 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.35■□□□□ 0.85
HPS1Q92902 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.35■□□□□ 0.85
HPS1Q92902 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HPS1Q92902 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HPS1Q92902 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HPS1Q92902 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HPS1Q92902 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HPS1Q92902 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.34■□□□□ 0.85
HPS1Q92902 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HPS1Q92902 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
HPS1Q92902 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HPS1Q92902 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.33■□□□□ 0.85
HPS1Q92902 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
HPS1Q92902 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HPS1Q92902 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HPS1Q92902 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HPS1Q92902 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HPS1Q92902 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.33■□□□□ 0.85
HPS1Q92902 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HPS1Q92902 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.33■□□□□ 0.84
HPS1Q92902 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HPS1Q92902 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
HPS1Q92902 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPS1Q92902 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.32■□□□□ 0.84
HPS1Q92902 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.32■□□□□ 0.84
HPS1Q92902 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.32■□□□□ 0.84
HPS1Q92902 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 422 ms