Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.77■□□□□ 0.44
NPIPB3Q92617 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPB3Q92617 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
NPIPB3Q92617 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.77■□□□□ 0.44
NPIPB3Q92617 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPIPB3Q92617 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB3Q92617 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB3Q92617 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB3Q92617 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
NPIPB3Q92617 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
NPIPB3Q92617 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPB3Q92617 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NPIPB3Q92617 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB3Q92617 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB3Q92617 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.76■□□□□ 0.43
NPIPB3Q92617 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NPIPB3Q92617 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB3Q92617 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NPIPB3Q92617 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB3Q92617 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPB3Q92617 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.76■□□□□ 0.43
NPIPB3Q92617 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.75■□□□□ 0.43
NPIPB3Q92617 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.75■□□□□ 0.43
NPIPB3Q92617 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
NPIPB3Q92617 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
NPIPB3Q92617 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPB3Q92617 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.74■□□□□ 0.43
NPIPB3Q92617 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPB3Q92617 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.74■□□□□ 0.43
NPIPB3Q92617 BHLHE23-202ENST00000612929 1109 ntBASIC17.74■□□□□ 0.43
NPIPB3Q92617 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.74■□□□□ 0.43
NPIPB3Q92617 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPB3Q92617 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB3Q92617 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB3Q92617 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NPIPB3Q92617 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.73■□□□□ 0.43
NPIPB3Q92617 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.73■□□□□ 0.43
NPIPB3Q92617 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB3Q92617 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB3Q92617 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB3Q92617 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPIPB3Q92617 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NPIPB3Q92617 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NPIPB3Q92617 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB3Q92617 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NPIPB3Q92617 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NPIPB3Q92617 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB3Q92617 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
NPIPB3Q92617 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPB3Q92617 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB3Q92617 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.72■□□□□ 0.43
NPIPB3Q92617 ABHD17AP5-201ENST00000580133 923 ntBASIC17.72■□□□□ 0.43
NPIPB3Q92617 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.72■□□□□ 0.43
NPIPB3Q92617 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB3Q92617 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NPIPB3Q92617 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NPIPB3Q92617 AC120024.1-201ENST00000562672 995 ntBASIC17.71■□□□□ 0.43
NPIPB3Q92617 NTF6A-201ENST00000591175 560 ntBASIC17.71■□□□□ 0.43
NPIPB3Q92617 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB3Q92617 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB3Q92617 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB3Q92617 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB3Q92617 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NPIPB3Q92617 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NPIPB3Q92617 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
NPIPB3Q92617 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB3Q92617 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB3Q92617 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPB3Q92617 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NPIPB3Q92617 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB3Q92617 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NPIPB3Q92617 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.7■□□□□ 0.42
NPIPB3Q92617 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.7■□□□□ 0.42
NPIPB3Q92617 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms