Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.27■□□□□ 0.84
GCN1Q92616 AL449106.1-201ENST00000608517 1980 ntBASIC20.27■□□□□ 0.84
GCN1Q92616 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.27■□□□□ 0.84
GCN1Q92616 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GCN1Q92616 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.27■□□□□ 0.84
GCN1Q92616 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.27■□□□□ 0.84
GCN1Q92616 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
GCN1Q92616 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.27■□□□□ 0.84
GCN1Q92616 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
GCN1Q92616 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
GCN1Q92616 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.27■□□□□ 0.83
GCN1Q92616 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.83
GCN1Q92616 AL445228.2-201ENST00000605589 952 ntBASIC20.27■□□□□ 0.83
GCN1Q92616 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GCN1Q92616 FOXO3B-201ENST00000395675 1928 ntBASIC20.26■□□□□ 0.83
GCN1Q92616 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GCN1Q92616 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.26■□□□□ 0.83
GCN1Q92616 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GCN1Q92616 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GCN1Q92616 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GCN1Q92616 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GCN1Q92616 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GCN1Q92616 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GCN1Q92616 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.26■□□□□ 0.83
GCN1Q92616 AC073912.3-201ENST00000624414 853 ntBASIC20.26■□□□□ 0.83
GCN1Q92616 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GCN1Q92616 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GCN1Q92616 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GCN1Q92616 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.25■□□□□ 0.83
GCN1Q92616 SLC7A5P1-201ENST00000568957 537 ntBASIC20.25■□□□□ 0.83
GCN1Q92616 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
GCN1Q92616 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GCN1Q92616 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
GCN1Q92616 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
GCN1Q92616 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GCN1Q92616 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
GCN1Q92616 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GCN1Q92616 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCN1Q92616 AL158047.1-201ENST00000445918 881 ntBASIC20.24■□□□□ 0.83
GCN1Q92616 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
GCN1Q92616 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.24■□□□□ 0.83
GCN1Q92616 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
GCN1Q92616 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GCN1Q92616 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GCN1Q92616 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GCN1Q92616 UNC93B4-201ENST00000505679 747 ntBASIC20.24■□□□□ 0.83
GCN1Q92616 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCN1Q92616 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCN1Q92616 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GCN1Q92616 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.23■□□□□ 0.83
GCN1Q92616 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCN1Q92616 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
GCN1Q92616 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GCN1Q92616 RNA5SP413-201ENST00000516373 109 ntBASIC20.23■□□□□ 0.83
GCN1Q92616 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GCN1Q92616 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.23■□□□□ 0.83
GCN1Q92616 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.23■□□□□ 0.83
GCN1Q92616 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCN1Q92616 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GCN1Q92616 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCN1Q92616 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
GCN1Q92616 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCN1Q92616 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.22■□□□□ 0.83
GCN1Q92616 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCN1Q92616 AC131274.2-201ENST00000580697 1507 ntBASIC20.22■□□□□ 0.83
GCN1Q92616 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GCN1Q92616 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.22■□□□□ 0.83
GCN1Q92616 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.22■□□□□ 0.83
GCN1Q92616 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GCN1Q92616 LINC01023-201ENST00000606054 436 ntBASIC20.22■□□□□ 0.83
GCN1Q92616 AL121832.2-201ENST00000610979 668 ntBASIC20.22■□□□□ 0.83
GCN1Q92616 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.22■□□□□ 0.83
GCN1Q92616 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GCN1Q92616 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.21■□□□□ 0.83
GCN1Q92616 KRT18P11-201ENST00000435214 1283 ntBASIC20.21■□□□□ 0.83
GCN1Q92616 KRT18P21-201ENST00000515767 1272 ntBASIC20.21■□□□□ 0.83
GCN1Q92616 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.21■□□□□ 0.83
GCN1Q92616 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
GCN1Q92616 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GCN1Q92616 KRT19P1-201ENST00000405746 1186 ntBASIC20.21■□□□□ 0.83
GCN1Q92616 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.21■□□□□ 0.83
GCN1Q92616 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
GCN1Q92616 AC006058.3-201ENST00000606217 1069 ntBASIC20.21■□□□□ 0.83
GCN1Q92616 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.21■□□□□ 0.83
GCN1Q92616 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
GCN1Q92616 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.21■□□□□ 0.83
GCN1Q92616 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GCN1Q92616 AC005181.1-201ENST00000604782 1256 ntBASIC20.2■□□□□ 0.82
GCN1Q92616 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GCN1Q92616 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
GCN1Q92616 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GCN1Q92616 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.2■□□□□ 0.82
GCN1Q92616 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GCN1Q92616 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GCN1Q92616 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.2■□□□□ 0.82
GCN1Q92616 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.2■□□□□ 0.82
GCN1Q92616 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GCN1Q92616 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.2■□□□□ 0.82
GCN1Q92616 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GCN1Q92616 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms