Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 MIR3960-201ENST00000583311 91 ntBASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L1Q8WWY6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 FBXW4P1-201ENST00000426721 2239 ntBASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 AC025884.2-201ENST00000553429 711 ntBASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L1Q8WWY6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD3L1Q8WWY6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MBD3L1Q8WWY6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD3L1Q8WWY6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MBD3L1Q8WWY6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MBD3L1Q8WWY6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD3L1Q8WWY6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MBD3L1Q8WWY6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD3L1Q8WWY6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MBD3L1Q8WWY6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD3L1Q8WWY6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.69■□□□□ 0.42
MBD3L1Q8WWY6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD3L1Q8WWY6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 AC026310.3-201ENST00000625186 2373 ntBASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MBD3L1Q8WWY6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.66■□□□□ 0.42
MBD3L1Q8WWY6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms