Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 AC026202.3-201ENST00000600805 1127 ntBASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.67■□□□□ 0.9
TRUB1Q8WWH5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRUB1Q8WWH5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB1Q8WWH5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TRUB1Q8WWH5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB1Q8WWH5 AC090877.2-201ENST00000558441 1738 ntBASIC20.66■□□□□ 0.9
TRUB1Q8WWH5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.66■□□□□ 0.9
TRUB1Q8WWH5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB1Q8WWH5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRUB1Q8WWH5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRUB1Q8WWH5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB1Q8WWH5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB1Q8WWH5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRUB1Q8WWH5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
TRUB1Q8WWH5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRUB1Q8WWH5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.64■□□□□ 0.9
TRUB1Q8WWH5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRUB1Q8WWH5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB1Q8WWH5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.64■□□□□ 0.89
TRUB1Q8WWH5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TRUB1Q8WWH5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB1Q8WWH5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB1Q8WWH5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB1Q8WWH5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB1Q8WWH5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 AC022413.1-201ENST00000624602 984 ntBASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
TRUB1Q8WWH5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB1Q8WWH5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB1Q8WWH5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB1Q8WWH5 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.6■□□□□ 0.89
TRUB1Q8WWH5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.6■□□□□ 0.89
TRUB1Q8WWH5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.6■□□□□ 0.89
TRUB1Q8WWH5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TRUB1Q8WWH5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB1Q8WWH5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB1Q8WWH5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRUB1Q8WWH5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB1Q8WWH5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB1Q8WWH5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB1Q8WWH5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB1Q8WWH5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB1Q8WWH5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB1Q8WWH5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.59■□□□□ 0.89
TRUB1Q8WWH5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRUB1Q8WWH5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
TRUB1Q8WWH5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.58■□□□□ 0.89
TRUB1Q8WWH5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.58■□□□□ 0.89
TRUB1Q8WWH5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRUB1Q8WWH5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRUB1Q8WWH5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRUB1Q8WWH5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.58■□□□□ 0.88
TRUB1Q8WWH5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRUB1Q8WWH5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRUB1Q8WWH5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms