Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC107Q8WV48 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC107Q8WV48 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC107Q8WV48 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC107Q8WV48 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC107Q8WV48 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC107Q8WV48 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC107Q8WV48 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC107Q8WV48 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCDC107Q8WV48 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC107Q8WV48 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC107Q8WV48 AC087393.1-201ENST00000582896 145 ntBASIC19.4■□□□□ 0.7
CCDC107Q8WV48 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC107Q8WV48 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC107Q8WV48 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC107Q8WV48 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC107Q8WV48 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC107Q8WV48 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CCDC107Q8WV48 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 AC129492.7-201ENST00000622992 756 ntBASIC19.39■□□□□ 0.69
CCDC107Q8WV48 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 GUSBP5-202ENST00000510805 1989 ntBASIC19.39■□□□□ 0.69
CCDC107Q8WV48 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC107Q8WV48 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC107Q8WV48 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 KRT18P60-201ENST00000312876 1297 ntBASIC19.37■□□□□ 0.69
CCDC107Q8WV48 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.37■□□□□ 0.69
CCDC107Q8WV48 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC107Q8WV48 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC107Q8WV48 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC107Q8WV48 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCDC107Q8WV48 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC107Q8WV48 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC107Q8WV48 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC107Q8WV48 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC107Q8WV48 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC107Q8WV48 ECEL1P1-201ENST00000373592 1742 ntBASIC19.36■□□□□ 0.69
CCDC107Q8WV48 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC107Q8WV48 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC107Q8WV48 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC107Q8WV48 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC107Q8WV48 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC107Q8WV48 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC107Q8WV48 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC107Q8WV48 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms