Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TMC1Q8TDI8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TMC1Q8TDI8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TMC1Q8TDI8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
TMC1Q8TDI8 ALDH1A3-203ENST00000557963 1670 ntBASIC31.45■■■□□ 2.63
TMC1Q8TDI8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TMC1Q8TDI8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
TMC1Q8TDI8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TMC1Q8TDI8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.45■■■□□ 2.63
TMC1Q8TDI8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.45■■■□□ 2.63
TMC1Q8TDI8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.45■■■□□ 2.63
TMC1Q8TDI8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.45■■■□□ 2.63
TMC1Q8TDI8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
TMC1Q8TDI8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
TMC1Q8TDI8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.44■■■□□ 2.62
TMC1Q8TDI8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TMC1Q8TDI8 DUX4L19-201ENST00000557448 1267 ntBASIC31.44■■■□□ 2.62
TMC1Q8TDI8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TMC1Q8TDI8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TMC1Q8TDI8 C17orf82-201ENST00000623772 1530 ntBASIC31.44■■■□□ 2.62
TMC1Q8TDI8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TMC1Q8TDI8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TMC1Q8TDI8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TMC1Q8TDI8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.42■■■□□ 2.62
TMC1Q8TDI8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
TMC1Q8TDI8 SUDS3P1-201ENST00000505831 966 ntBASIC31.42■■■□□ 2.62
TMC1Q8TDI8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TMC1Q8TDI8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
TMC1Q8TDI8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 SERBP1P1-201ENST00000396021 1160 ntBASIC31.41■■■□□ 2.62
TMC1Q8TDI8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 AC141586.4-201ENST00000624558 1573 ntBASIC31.41■■■□□ 2.62
TMC1Q8TDI8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.41■■■□□ 2.62
TMC1Q8TDI8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TMC1Q8TDI8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TMC1Q8TDI8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
TMC1Q8TDI8 AC092171.4-201ENST00000609130 632 ntBASIC31.4■■■□□ 2.62
TMC1Q8TDI8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TMC1Q8TDI8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TMC1Q8TDI8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TMC1Q8TDI8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TMC1Q8TDI8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TMC1Q8TDI8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC31.39■■■□□ 2.62
TMC1Q8TDI8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TMC1Q8TDI8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.39■■■□□ 2.62
TMC1Q8TDI8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TMC1Q8TDI8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC31.39■■■□□ 2.62
TMC1Q8TDI8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.61
TMC1Q8TDI8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 AL355001.2-201ENST00000620617 1191 ntBASIC31.38■■■□□ 2.61
TMC1Q8TDI8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
TMC1Q8TDI8 EDA-201ENST00000338901 1233 ntBASIC31.37■■■□□ 2.61
TMC1Q8TDI8 ZNRF2P3-201ENST00000424200 374 ntBASIC31.37■■■□□ 2.61
TMC1Q8TDI8 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.37■■■□□ 2.61
TMC1Q8TDI8 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.37■■■□□ 2.61
TMC1Q8TDI8 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.37■■■□□ 2.61
TMC1Q8TDI8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TMC1Q8TDI8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TMC1Q8TDI8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TMC1Q8TDI8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TMC1Q8TDI8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.36■■■□□ 2.61
TMC1Q8TDI8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TMC1Q8TDI8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TMC1Q8TDI8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.36■■■□□ 2.61
TMC1Q8TDI8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
TMC1Q8TDI8 AC006455.2-201ENST00000429931 906 ntBASIC31.35■■■□□ 2.61
TMC1Q8TDI8 MIR4767-201ENST00000582827 78 ntBASIC31.35■■■□□ 2.61
TMC1Q8TDI8 AC004812.2-201ENST00000611079 2094 ntBASIC31.35■■■□□ 2.61
TMC1Q8TDI8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TMC1Q8TDI8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
TMC1Q8TDI8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
TMC1Q8TDI8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
TMC1Q8TDI8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TMC1Q8TDI8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TMC1Q8TDI8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.34■■■□□ 2.61
TMC1Q8TDI8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.34■■■□□ 2.61
TMC1Q8TDI8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TMC1Q8TDI8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
TMC1Q8TDI8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.33■■■□□ 2.61
TMC1Q8TDI8 AF213884.3-201ENST00000563833 479 ntBASIC31.33■■■□□ 2.61
TMC1Q8TDI8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC31.33■■■□□ 2.61
TMC1Q8TDI8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TMC1Q8TDI8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.33■■■□□ 2.61
TMC1Q8TDI8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms