Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.07
SMIM11BQ8TCY0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 DUX4L29-201ENST00000425409 679 ntBASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 AC126177.7-201ENST00000547904 679 ntBASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SMIM11BQ8TCY0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 AC044849.2-201ENST00000606596 710 ntBASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMIM11BQ8TCY0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 C11orf96-202ENST00000528572 1834 ntBASIC14.62□□□□□ -0.07
SMIM11BQ8TCY0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 AP006261.1-201ENST00000584783 668 ntBASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SMIM11BQ8TCY0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 HLA-V-202ENST00000446817 847 ntBASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SMIM11BQ8TCY0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM11BQ8TCY0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms