Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SPTSSBQ8NFR3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 AL117328.2-201ENST00000624617 1940 ntBASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPTSSBQ8NFR3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.46□□□□□ -0.41
SPTSSBQ8NFR3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPTSSBQ8NFR3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPTSSBQ8NFR3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPTSSBQ8NFR3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPTSSBQ8NFR3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPTSSBQ8NFR3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPTSSBQ8NFR3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
SPTSSBQ8NFR3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC12.46□□□□□ -0.42
SPTSSBQ8NFR3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPTSSBQ8NFR3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPTSSBQ8NFR3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SPTSSBQ8NFR3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SPTSSBQ8NFR3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms