Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM2Q8N967 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM2Q8N967 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.5■□□□□ 0.55
LRTM2Q8N967 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.5■□□□□ 0.55
LRTM2Q8N967 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.5■□□□□ 0.55
LRTM2Q8N967 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM2Q8N967 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRTM2Q8N967 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.49■□□□□ 0.55
LRTM2Q8N967 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM2Q8N967 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM2Q8N967 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM2Q8N967 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.49■□□□□ 0.55
LRTM2Q8N967 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM2Q8N967 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM2Q8N967 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM2Q8N967 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
LRTM2Q8N967 ALDH1A3-203ENST00000557963 1670 ntBASIC18.49■□□□□ 0.55
LRTM2Q8N967 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.49■□□□□ 0.55
LRTM2Q8N967 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM2Q8N967 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM2Q8N967 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.49■□□□□ 0.55
LRTM2Q8N967 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LRTM2Q8N967 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LRTM2Q8N967 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.48■□□□□ 0.55
LRTM2Q8N967 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.48■□□□□ 0.55
LRTM2Q8N967 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.48■□□□□ 0.55
LRTM2Q8N967 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.48■□□□□ 0.55
LRTM2Q8N967 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LRTM2Q8N967 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM2Q8N967 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.48■□□□□ 0.55
LRTM2Q8N967 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.48■□□□□ 0.55
LRTM2Q8N967 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LRTM2Q8N967 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM2Q8N967 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.48■□□□□ 0.55
LRTM2Q8N967 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM2Q8N967 AL024507.2-201ENST00000606070 2574 ntBASIC18.48■□□□□ 0.55
LRTM2Q8N967 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM2Q8N967 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRTM2Q8N967 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRTM2Q8N967 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
LRTM2Q8N967 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.47■□□□□ 0.55
LRTM2Q8N967 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.47■□□□□ 0.55
LRTM2Q8N967 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRTM2Q8N967 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRTM2Q8N967 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM2Q8N967 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
LRTM2Q8N967 AL592295.1-201ENST00000400984 884 ntBASIC18.46■□□□□ 0.55
LRTM2Q8N967 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM2Q8N967 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM2Q8N967 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.46■□□□□ 0.55
LRTM2Q8N967 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM2Q8N967 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM2Q8N967 AC092053.2-201ENST00000640557 1818 ntBASIC18.46■□□□□ 0.55
LRTM2Q8N967 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM2Q8N967 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRTM2Q8N967 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRTM2Q8N967 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LRTM2Q8N967 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
LRTM2Q8N967 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.45■□□□□ 0.54
LRTM2Q8N967 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM2Q8N967 AC139530.1-201ENST00000575312 1977 ntBASIC18.45■□□□□ 0.54
LRTM2Q8N967 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM2Q8N967 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM2Q8N967 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM2Q8N967 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LRTM2Q8N967 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM2Q8N967 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRTM2Q8N967 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.44■□□□□ 0.54
LRTM2Q8N967 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRTM2Q8N967 C11orf96-202ENST00000528572 1834 ntBASIC18.44■□□□□ 0.54
LRTM2Q8N967 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM2Q8N967 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.44■□□□□ 0.54
LRTM2Q8N967 AC022413.1-201ENST00000624602 984 ntBASIC18.44■□□□□ 0.54
LRTM2Q8N967 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRTM2Q8N967 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.44■□□□□ 0.54
LRTM2Q8N967 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.44■□□□□ 0.54
LRTM2Q8N967 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM2Q8N967 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LRTM2Q8N967 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LRTM2Q8N967 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM2Q8N967 RPS2P7-201ENST00000447334 885 ntBASIC18.43■□□□□ 0.54
LRTM2Q8N967 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LRTM2Q8N967 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.43■□□□□ 0.54
LRTM2Q8N967 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRTM2Q8N967 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.43■□□□□ 0.54
LRTM2Q8N967 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.43■□□□□ 0.54
LRTM2Q8N967 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM2Q8N967 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM2Q8N967 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms