Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 AC022616.5-201ENST00000518796 181 ntBASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 AC019171.1-201ENST00000601251 1056 ntBASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLDN22Q8N7P3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 AC012354.3-201ENST00000623734 483 ntBASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN22Q8N7P3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN22Q8N7P3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN22Q8N7P3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLDN22Q8N7P3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CLDN22Q8N7P3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CLDN22Q8N7P3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN22Q8N7P3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN22Q8N7P3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN22Q8N7P3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN22Q8N7P3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CLDN22Q8N7P3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CLDN22Q8N7P3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN22Q8N7P3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 C1orf229-201ENST00000623686 2258 ntBASIC20.5■□□□□ 0.87
CLDN22Q8N7P3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 AC120024.1-201ENST00000562672 995 ntBASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN22Q8N7P3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.48■□□□□ 0.87
CLDN22Q8N7P3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN22Q8N7P3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN22Q8N7P3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN22Q8N7P3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.48■□□□□ 0.87
CLDN22Q8N7P3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN22Q8N7P3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms