Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01561Q8N1V8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01561Q8N1V8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01561Q8N1V8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01561Q8N1V8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01561Q8N1V8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01561Q8N1V8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01561Q8N1V8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01561Q8N1V8 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 AC137767.1-201ENST00000602918 1920 ntBASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 C1orf229-201ENST00000623686 2258 ntBASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 AC242852.2-201ENST00000615738 1807 ntBASIC15.13■□□□□ 0.01
LINC01561Q8N1V8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 DUX4L9-201ENST00000449051 1259 ntBASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01561Q8N1V8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01561Q8N1V8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01561Q8N1V8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC01561Q8N1V8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
LINC01561Q8N1V8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.08■□□□□ 0.01
LINC01561Q8N1V8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LINC01561Q8N1V8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01561Q8N1V8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC01561Q8N1V8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01561Q8N1V8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC01561Q8N1V8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01561Q8N1V8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01561Q8N1V8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01561Q8N1V8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01561Q8N1V8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC01561Q8N1V8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LINC01561Q8N1V8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LINC01561Q8N1V8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms